Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3127 ATGGAGACACAAAGCCAGCTCCATGTTTCATCAAATTCAAATCAGCACAAAGAAGGAACCTCTTTTTTCAAAACTTGTTTCAATGGACTCAACACCTTAGCAGGTATGGGAATGCTCTCAATGCCATATGCAATTTCACAAGGAGGTTGGATAAGTTTTATGCTTCTGATTATTTTGGCCGTGATATGTTGGTACACAGCTTTACTTCTAGGAAGATGCATGCACCAACAACCACTAATCAAATCCTATGCTGATATAGCTGAGGTTGCTTTTGGTTACAAAGGAAGAACTTTCATTGCAACTTTCTTATATCTAGAGCTTTTTTTAATTCTTGTGGAGCTTCTTATACTAGAAGGAGACAATTTGGCCAAATTGTTCCCAAATATGAGTTTCACAATGATAGGGTTCAAGATTGGAAGTAAAAGTGCTTTTGTGTTAATCACTGCTTTGATAGTATTGCCAACAACTTGGTTGAGAAGTTTAGGGGCTTTGGCTTATATATCTTTTGGAGGGATTGTAACTTCTTTGATTTTAATTGGTTGTATTGTGTGGGTGGGTGAAGTGGATGGTGTTGGGTTTCATGAAAGAGGAAAGTTACTGAATTTGGGAGGTTTGTCTACTTCTATGAGCCTTTTTGCTTTCTGTTTTTCTGCTCATGCATTGATGCCAACAATATGCAATTCTATGAATGATAGAAACCAGTACTCTAAGGTTATGCTGGTTTGCTTTGCTGCAAGTACTGTTATCTATGGAACCATTGCAGTATTAGGCTACATGATGTTTGGAGATAATTTGAAATCTCAAATCACATTAAATCTACCAACAAATACAATAAGTACAAAAATAGCAATATATACCACAGTAATTAATCCTTTCACTAAGTATGCTATTGTAATCACTCCAATAATCAATGCCATTGAGGAAAAATGGCATCTGTGTAAGAAAAGACCTATCAGCATTCTCATTAGAACCACCATTGTTGTCATCAGTGTGGTTGTGGCTCTTTTTGTTCCGTTGTTTGGATACATTATGGCATTTATTGGTGCTTTCTTGTGTGTGTCCATCTCATTATTGTTTCCTTGCCTATGCTACTTGAAGATGCACAAAGCTGCAAGGAGATTTGGGTTAGAATTGATCATAATTGTAGCAATTCTGGTCATTGGTACATTTATTGGAATACAGGGTACCTACACTTCACTTGTGCAAATAGTAAAAAATGTAAAGCTGTGA 1230 0.3642 METQSQLHVSSNSNQHKEGTSFFKTCFNGLNTLAGMGMLSMPYAISQGGWISFMLLIILAVICWYTALLLGRCMHQQPLIKSYADIAEVAFGYKGRTFIATFLYLELFLILVELLILEGDNLAKLFPNMSFTMIGFKIGSKSAFVLITALIVLPTTWLRSLGALAYISFGGIVTSLILIGCIVWVGEVDGVGFHERGKLLNLGGLSTSMSLFAFCFSAHALMPTICNSMNDRNQYSKVMLVCFAASTVIYGTIAVLGYMMFGDNLKSQITLNLPTNTISTKIAIYTTVINPFTKYAIVITPIINAIEEKWHLCKKRPISILIRTTIVVISVVVALFVPLFGYIMAFIGAFLCVSISLLFPCLCYLKMHKAARRFGLELIIIVAILVIGTFIGIQGTYTSLVQIVKNVKL* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3127 409 Pfam Transmembrane amino acid transporter protein 19 396 IPR013057 -
Psa4g3127 409 PANTHER OS06G0228500 PROTEIN 16 405 - -
Psa4g3127 409 PANTHER OS05G0424000 PROTEIN-RELATED 16 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3127 Psa-Chr4 256327653 256329496 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3127 1 407 Amino Acid or Auxin Permease AAAP Family AT3G28960 44.634 4.54e-131 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3127 K15015 - gmx:100812006 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3127 4 256327653 256329496 Psa4g3127 4 256327653 256329496 ECH