Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3091 ATGCATTTAGTTGCACCATTAGACAAGCATTTCCCTTTACTCTATGCTATTCGAAGGAGCACATTGCAGATGATGTTGACTACAAGGTTCTTGTTTTCTGCACAACCGCTATGGTCACAAGACTTGTTGGCTGATCTCCTTGGGGAGTTGAACTTGAATGTGAGAGAAATCCATTCAAGAAAGCCTCAGAGTTATAGAACCAGAGTTTCTGATGAATTCCGGAAGTCAAAGGGTCTCATCTTGGTTACTTCGGATGTATCTGCACGTGGAGTTGATTATCCAGATGTTACTCTTGTTGTACAGGTTGGTCTACCGCTGATAGAGAACAATATATACATCGGACTAGTAGAACGGGGAGAAGAGGAAAGAAGGCAGGGCATTCTGCTACTAGCTCCTTGGGAAGAGTTCTTTTTAGCTACTGCAAAAAGATTACCTATTGGGAAAGCTCCGGTCCCTTCAGTTGATCCTGCCACACATAAAAAGGTGGAAAGGGCTCTATCCAATGTGGAGATGAAAAATAAGAAGCAGCATATCAGGCATGGCTTGGTTACTACAACTCTAACAAGAAAGTGGGGAAAGATAAAGTTATAG 591 0.4247 MHLVAPLDKHFPLLYAIRRSTLQMMLTTRFLFSAQPLWSQDLLADLLGELNLNVREIHSRKPQSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVVQVGLPLIENNIYIGLVERGEEERRQGILLLAPWEEFFLATAKRLPIGKAPVPSVDPATHKKVERALSNVEMKNKKQHIRHGLVTTTLTRKWGKIKL* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3091 196 Pfam Helicase conserved C-terminal domain 45 105 IPR001650 -
Psa4g3091 196 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 20 190 IPR001650 -
Psa4g3091 196 PANTHER RNA HELICASE 2 176 - -
Psa4g3091 196 SMART helicmild6 41 119 IPR001650 -
Psa4g3091 196 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED 2 176 - -
Psa4g3091 196 Gene3D - 38 193 IPR027417 -
Psa4g3091 196 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 147 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3091 Psa-Chr4 253321248 253322914 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3091 41 149 Eukaryotic Initiation Factors Gene Family AT3G19760 29.752 2.71e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3091 - - cit:102616648 219.164