Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3031 ATGACTGTGGTAACCTTTTTGGCAGACACATATGGAATTGATGGAAATATTCCCCTAGAATTTGGAAACATGACCAACTTGCTATATTTTTCTATATCAATGGACCAATTCTATGGGTTAATTCCCACGTCACTTGGTGGCATGGTTGAAAATACTCTTGAAAGAGGTTTATCAACTTTAGGAGCTCAAAGAAGAATTTCTTATTATGAACTTGTGCAAGCAACAAATGGATTCAACGAGGATAACTTACTTGGAAACATAACTTCAGTAGTCTTTACCGCAAATTTATGTGGAATTTATGGTAATATTCCCTTAGAAATTGGAAACATGAGCAATTTGATATCTCTTTCTATGTTTGGGAATAATATAAATGGACCCGTACCTGGAACATTCAAAGGGTTACAGAAACTTCAGAAATTGGAACTGAGCAACAATGATCTACATGGATCATTTATTGACGAGCTTTGTGAAATGGAGAGTTTAATGCAAAATCTCTCCTTAGCACATAACAAACTGTATGGATCAATTCCCACGTCACTTGGTGACATGGTAGACTTGATCTCCTTGGACTTGTCCCAAAATATGCTACCTGGTGTTATTCCAAAATCATTAACATCACTTTCGTATCTTAAAAATATCAACTTCTCATATAATAGCTTACAAGGAGAAATTCCCGATGGTGGACTTTTTAAAACTTTCACATCCCAATCTTTTATGCATAATGAAGCTCTTTGCGGAAATCCTCGTTTTCAAGTGCCTCTATGTCCTAAACAAGTTAGGAAGAGTTCAAGGACAAAAATCTTATTACTCAAATGCATAATTCCTCTAGTTCTGTCAACCATTTTGGTTGTTGCATTCATAATGCTTTTAAAACATAAACAGAAAAAGGTTGAAAATACTCTTGAAAGGGGGTTATCAACTTTAGGAGCTCCAAGAAGAATTTCTTATTATGAACTTGTGCAAGCAACAAATGGATTCAAGAGAGTAATTTTCATGGAAAGCTTCTTAATGTCAGAGGAAAAATCAAGGACCTTTGATGCAGAATGCAATGCAATGAGAAATCTACGACATCGAAATCTAGTTAAGATTATCAGCAGTTGCTCAAATCTTAATTTCAAGTCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTGGACAAATGGTTGTATTCAGATAATTATTATTTGACTTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTCCATCATGGTTCTCCAATACCAGTGGTTCATTGTGACCTAAAGCCTACAAATGTGTTGCTGGATGAAGATATGGTTGCACATGTTAGCGATTTTGGTATTGCGAAGCTCATGGATGAAGGACAATCTAAAACCCATACAGATACTTTGGCTACTATTGGATACCTTGCACCAGAGTATGCATCTGAGGGAATTGTTTCTATCAAAGGGGATGTGTACAACTATGGGATAATGCTAATGGAAATTTTTACAAGAAGAAAACCAACTGATGATATTTTTGTTGGAGATCTAAGTTTGAAAACATGGATCAGTGGATTATTGCCTAATTCAATTTTGGAGGTCCTGGATTCTAATTTAATCCAACAGAACGGAGTACAAATGGATAAGATATTGACACGTGTCATCTATTTTTGGTTTTAG 1662 0.3532 MTVVTFLADTYGIDGNIPLEFGNMTNLLYFSISMDQFYGLIPTSLGGMVENTLERGLSTLGAQRRISYYELVQATNGFNEDNLLGNITSVVFTANLCGIYGNIPLEIGNMSNLISLSMFGNNINGPVPGTFKGLQKLQKLELSNNDLHGSFIDELCEMESLMQNLSLAHNKLYGSIPTSLGDMVDLISLDLSQNMLPGVIPKSLTSLSYLKNINFSYNSLQGEIPDGGLFKTFTSQSFMHNEALCGNPRFQVPLCPKQVRKSSRTKILLLKCIIPLVLSTILVVAFIMLLKHKQKKVENTLERGLSTLGAPRRISYYELVQATNGFKRVIFMESFLMSEEKSRTFDAECNAMRNLRHRNLVKIISSCSNLNFKSLVMEFMSNGSVDKWLYSDNYYLTFLQRLNIMIDVASALEYLHHGSPIPVVHCDLKPTNVLLDEDMVAHVSDFGIAKLMDEGQSKTHTDTLATIGYLAPEYASEGIVSIKGDVYNYGIMLMEIFTRRKPTDDIFVGDLSLKTWISGLLPNSILEVLDSNLIQQNGVQMDKILTRVIYFWF* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3031 553 PANTHER RECEPTOR-LIKE PROTEIN 55 90 162 - -
Psa4g3031 553 PANTHER RECEPTOR-LIKE PROTEIN 55 162 548 - -
Psa4g3031 553 PANTHER RECEPTOR-LIKE PROTEIN 55 57 86 - -
Psa4g3031 553 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 57 86 - -
Psa4g3031 553 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 162 548 - -
Psa4g3031 553 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 90 162 - -
Psa4g3031 553 SUPERFAMILY L domain-like 96 250 - -
Psa4g3031 553 SUPERFAMILY Protein kinase-like (PK-like) 338 517 IPR011009 -
Psa4g3031 553 SMART serkin_6 317 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3031 553 Gene3D Transferase(Phosphotransferase) domain 1 384 550 - -
Psa4g3031 553 Gene3D Phosphorylase Kinase; domain 1 322 383 - -
Psa4g3031 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Psa4g3031 553 Gene3D Ribonuclease Inhibitor 11 263 IPR032675 -
Psa4g3031 553 ProSiteProfiles Protein kinase domain profile. 302 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3031 553 Pfam Protein tyrosine and serine/threonine kinase 338 502 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3031 Psa-Chr4 246675269 246677846 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3031 13 535 Receptor kinase-like Gene Family AT3G47570 34.448 1.19e-94 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Psa4g3031 PK_Tyr_Ser-Thr 1.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3031 - K13420 mtr:MTR_8g465340 625.55