Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3010 ATGAAGGGATGGGATGGGATTCAATCTTCTCTCTCTTCTCGATCGAGTTCCTCGATGAGCCATCGAGTTCCCTCTCAATCGGTTCGACTCGGACGAGTCCAACCTCAGGCTCCATCTTATCGCACCATTTTCTGTAACGATCGTGATTCCAATCTTCTTGTTCGATTCAAGGGAAATTCAATATCGACCACAAAATACAACTTTTTCACCTTTCTGCCTAAAGGATTATTTGAACAGTTCAGGCGGGTGGCTAATCTCTACTTTCTTACAATCTCAATTTTGTCAACCACCCCAATTAGTCCTGTCTCTCCAATAACTAATGTGCTTCCTCTATCTTTGGTGCTTCTCGTTTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAACGTTTTCAAAATGACATGTCCATAAACAATAATATGATAGATGTTTTACAAGACCAAAAGTGGGTGCCTGTACCCTGGAAAAAGTTGCAGGTCGGAGATATTATCAAGGTTAAGCAGGATGGATTCTTTCCTGCAGATTTGCTTTTCTTGGCCAGTACGAATGCAGATGGTGTCTGCTACATTGAGACTGCAAATTTGGACGGGGAGACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACCTGGGATTACCTGACCCCAGAGAAGGCATCCGAGTTTAAAGGTGAAATTCAATGTGAACAACCAAACAATTCCTTGTATACATTTACAGGAAATCTTTTGATTCAAAAGCAGACACTTCCACTAAGCCCAAACCAGATTCTTTTGCGAGGATGCAGTCTCAGAAATACAGAGTATATTGTTGGTGTTGTTATTTTTACAGGGCAAGAAACAAAGGTGATGATGAACTCAATGAATGTTCCTTCCAAAAGAAGTACACTGGAGAGGAAACTTGACAAGCTCATACTCACTCTCTTTGCAACACTTTTTATGATGTGTTTTATTGGAGCCATTGGCAGTGCTATTTTTGTAAACAAAAAATACTTTTATTTACATCTTGATTCATCAGAGGAGGGCTCAGCACAGTTCAATCCAAAAAACAGATTTCTGGTTTTTATTCTGACTATGTTTACCCTTATCACTCTGTATTCAACAATCATCCCAATTTCACTTTATGTGTCTATAGAGATGATAAAATTTATTCAATCAACTCAATTTATCAACAAGGATTTGGGAATGTACCACAGTGAAACCAATACACCGGCATTGGCTAGAACTTCAAATCTGAATGAAGAACTTGGACAGGTGGAATACATTTTCTCTGACAAAACTGGGACCCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATAGGAGTAGAGGTCTATGGAAATGGCGTGACTGAAATTGAGAGAGGACTAGCAGAGCGCAATGGCATGAAAATTGAGGAAAATAGACCACCCCATACTGTGCATGAGAGGGGTTTCAATTTTGAAGATGCCAGGCTTATGAGAGGAGCTTGGAGGAATGAACCCAATCCTGATGCCTGCAAAGAATTCTTCAGATGTCTTGCTATATGCCATACTGTACTACCAGAGGGTGATGAGCAGTCCCCTGAAAAGATCAAATATCAAGCTGCATCACCTGATGAGGCTGCTTTGGTTATTGCTGCAAAAAACTTTGGTTTCTTCTTCTACAGGCGCACACCTACGACAATTTATGTTAAAGAATCTCATGTTGAGAAGATGGGCAAAGTTCAAGATTTATCCTATGAGATTCTCAATGTGCTCGAGTTTAATAGTACAAGGAAGCGTCAGTCAGTTGTATGTCGTTGTCCTGATGGAAGGCTTGTACTATACTGCAAGGGTGCTGATAATGTAATCTATGAGAGACTGGCTGAATACAACAATGATATCAAGAAAATCACTAGGGAGTATTTGGAGCAATTTGGATCTTCTGGACTGCGTACATTATGCCTGGCTTACAAAGAATTGCATCCAGATGTTTATGAGAGCTGGAATGAGAAGTTTATCCAGGCCAAATCTTCTTTACATGACCGTGAAAAGAAATTAGACGAGGTGGCAGAACTCATAGAAAATGATCTCATTTTAATTGGTAGCACTGCAATAGAAGACAAGCTTCAAGAGGGAGTACCAGCATGCATAGAGACTCTTCAAAGAGCTGGAATTAAAATTTGGGTTCTGACAGGAGACAAGATTGAAACAGCAATAAACATAGCATATGCATGCAATTTGATCAACAATGAGATGAAGCAATTCGTTATCAGTTCAGAAACTAATGCAATTAGAGAAGTTGAAGAAAGGGGTGACCAAGTGGAAATTGCAAGATTTATTAAAGAAGAAGTGAAAAAAGAACTGAAGAAAAGCCTCGAGGAAGCACAAAGCTATTTTCACACTTTATCTGGACCAAAGTTAGCACTTATAATTGATGGAAAGTGTCTAATGTATGCATTGGATCCAAGTTTAAGGGTGATGCTGCTCAATCTTAGTTTGAATTGTCATGCTGTTGTTTGCTGCAGAGTTTCTCCTCTACAGAAAGCACAGGTCACAAGTATGGTCAAGAAAGGTGCAAAGAAAATAACTCTTAGTATTGGTGATGGAGCTAATGATGTAAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATTAGTGGAATGGAGGGAATGCAAGCTGTGATGGCTAGTGATTTTGCCATTGCACAGTTCCGTTACCTTGAAGATTTGCTTCTTGTTCATGGCCGCTGGTCATATCTGCGAATATGCAAGGTGGTGTTATATTTCTTTTACAAGAATCTTACATTTACTCTTACTCAGTTTTGGTTTACTTTTCAAACTGGGTTTTCTGGTCAAAGGTTTTATGATGATTGGAATCAGTCTTTATATAATGTTATTTTCACGGCACTGCCTGTGATTATAGTTGGACTATTTGACAAGGATGTTAGTGCATCTCTATCCAAGAAATATCCCGCATTATACATGGAGGGAATAAAAAATGTCTACTTTCAATGGAAAGTCGTGGCTATATGGGCCTTTTTTTCTGTATACCAGTCTCTAGTATTCTTCTTTTTTGTGAGTACATCAACTTTAAGTGCTAAAAACTCGGATGGAAAGACATTTGGACTCTGGGATGTCAGTACAATGGCTTTCACTTGTGTTGTAGTAACCGTCAACTTGAGATTACTTATGATTTGTAATTCAATCACAAGATGGCACTACATTAGTGTTGGTGGAAGCATATTAGCTTGGTTCGTTTTTATTTTTATATATTCAGGGATTACCACTCCTTATGATCGACAGGAGAATGTTTATTTTGTCATATATGTATTGATGAGTACTGTCTATTTCTACCTCACACTACTACTTGTTCCTGTTGCTGCACTTTTCTGCGACTTTGTTTATCAAGGGGTTCAAAGATGGTTCTCCCCCTATGATTATCAGATTGTTCAAGAAATACATAGACATGAGATTGATAGCACTGGTAGGGCACAGCTGCTGGAGATAGGGAACCAGCTTTCACCAACTGAAGCAAGGAGCTATGCCGTATCTCAACTCCCACGAGAGATATCAAAGCACACCGGATTTGCTTTTGATTCACCTGGTTATGAGTCATTTTTTGCTACACAGTTTGGCACTTATGCTCCACCAAAGGCATGGGATGTAGCAAGACGGGCTAGCATGAGATCGCGGCACAAGACTGAACAGAAAAAGTAA 3678 0.394 MKGWDGIQSSLSSRSSSSMSHRVPSQSVRLGRVQPQAPSYRTIFCNDRDSNLLVRFKGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSLVLLVSLIKEAFEDWKRFQNDMSINNNMIDVLQDQKWVPVPWKKLQVGDIIKVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEIQCEQPNNSLYTFTGNLLIQKQTLPLSPNQILLRGCSLRNTEYIVGVVIFTGQETKVMMNSMNVPSKRSTLERKLDKLILTLFATLFMMCFIGAIGSAIFVNKKYFYLHLDSSEEGSAQFNPKNRFLVFILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLGMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGVEVYGNGVTEIERGLAERNGMKIEENRPPHTVHERGFNFEDARLMRGAWRNEPNPDACKEFFRCLAICHTVLPEGDEQSPEKIKYQAASPDEAALVIAAKNFGFFFYRRTPTTIYVKESHVEKMGKVQDLSYEILNVLEFNSTRKRQSVVCRCPDGRLVLYCKGADNVIYERLAEYNNDIKKITREYLEQFGSSGLRTLCLAYKELHPDVYESWNEKFIQAKSSLHDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETNAIREVEERGDQVEIARFIKEEVKKELKKSLEEAQSYFHTLSGPKLALIIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSMVKKGAKKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLEDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWNQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPALYMEGIKNVYFQWKVVAIWAFFSVYQSLVFFFFVSTSTLSAKNSDGKTFGLWDVSTMAFTCVVVTVNLRLLMICNSITRWHYISVGGSILAWFVFIFIYSGITTPYDRQENVYFVIYVLMSTVYFYLTLLLVPVAALFCDFVYQGVQRWFSPYDYQIVQEIHRHEIDSTGRAQLLEIGNQLSPTEARSYAVSQLPREISKHTGFAFDSPGYESFFATQFGTYAPPKAWDVARRASMRSRHKTEQKK* 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3010 1225 SUPERFAMILY HAD-like 409 895 IPR036412 -
Psa4g3010 1225 CDD P-type_ATPase_APLT_Dnf-like 58 1013 - -
Psa4g3010 1225 Pfam E1-E2 ATPase 138 377 - -
Psa4g3010 1225 Pfam Phospholipid-translocating P-type ATPase C-terminal 881 1131 IPR032630 -
Psa4g3010 1225 SFLD Haloacid Dehalogenase 403 904 - -
Psa4g3010 1225 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 472 691 IPR023299 GO:0000166
Psa4g3010 1225 MobiDBLite consensus disorder prediction 1 33 - -
Psa4g3010 1225 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 13 1221 - -
Psa4g3010 1225 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 56 1139 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Psa4g3010 1225 Pfam Phospholipid-translocating ATPase N-terminal 43 107 IPR032631 -
Psa4g3010 1225 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 13 1221 - -
Psa4g3010 1225 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1130 IPR023298 -
Psa4g3010 1225 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 826 932 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa4g3010 1225 Gene3D - 686 893 IPR023214 -
Psa4g3010 1225 Gene3D - 550 685 IPR023299 GO:0000166
Psa4g3010 1225 ProSitePatterns E1-E2 ATPases phosphorylation site. 423 429 IPR018303 -
Psa4g3010 1225 SFLD p-type atpase 403 904 IPR044492 -
Psa4g3010 1225 PRINTS P-type cation-transporting ATPase superfamily signature 421 435 - -
Psa4g3010 1225 PRINTS P-type cation-transporting ATPase superfamily signature 853 872 - -
Psa4g3010 1225 Pfam Cation transport ATPase (P-type) 517 614 - -
Psa4g3010 1225 SUPERFAMILY Calcium ATPase, transduction domain A 138 282 IPR008250 -
Psa4g3010 1225 Gene3D - 121 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3010 Psa-Chr4 244694045 244734980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3010 7 1224 Primary Pumps ATPases AT1G59820 78.671 0.0 2047
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3010 K14802 - gmx:100815547 2211.42