Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3000 ATGGCCAACAAGAGTGAAGTGAAGCTTATTGGAAAATGGTCAAGTCCTTATGTGACAAGGGTGAAGATTGCCCTAAACATCAAATCGCTTGATTATGAAAACTTTGAAGAGAACGAAACTTTTAACCCCAAAAGCGATCTTCTTCTTCAATCCAACCCTGTTTATGGCAAAGTCCCTGTTCTCATTCACCTAGACAAACCCATCTGTGAGTCTCTCATCATTCTTGAATATATTGATGAGACTTGGTCAACTGCTCTTTCTATTCTCCCCACCGATCCTTATGATAGAGTTCTTGCTCGGTTCTGGGCTGCTTATATAGATCAAAAGTGGTTTCCTTGTATGCAAAGCATAATTACTGTTGAAGTAGAGGAGGAAAGGAAGCCATATTTTGAAGTCATGGAAGAAGTGGTTGAGAGGATGGAGGATGCTTTTGAAAAATGCAGTAAAGGAAAGCCCTTTTTTGGTGGTGACAGGATTGGGTATCTTGATGTTGCATTTGGGAGCTTTTTGGGATGGCTTAGTGTGATAGAGAATGAGTATGAAAGGAAAGTGTTGGTTGAAGAAAAATCTCCTAATTTGGTGAAATGGGCTGAGAGATTTATTGCTGACCCTGCTGTTGTCGGGCTTATACCCGAGACTGAGAGACTTGTTAAGCTTTCCAAAGCCCTTCAGATCAAATGGAGAGCTGCTCTTGAAGAACAATGGATGAAAATCAAGATAGATTGA 726 0.4063 MANKSEVKLIGKWSSPYVTRVKIALNIKSLDYENFEENETFNPKSDLLLQSNPVYGKVPVLIHLDKPICESLIILEYIDETWSTALSILPTDPYDRVLARFWAAYIDQKWFPCMQSIITVEVEEERKPYFEVMEEVVERMEDAFEKCSKGKPFFGGDRIGYLDVAFGSFLGWLSVIENEYERKVLVEEKSPNLVKWAERFIADPAVVGLIPETERLVKLSKALQIKWRAALEEQWMKIKID* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3000 241 CDD GST_N_Tau 7 82 - -
Psa4g3000 241 CDD GST_C_Tau 93 223 IPR045074 GO:0004364|GO:0006749
Psa4g3000 241 Pfam Glutathione S-transferase, N-terminal domain 6 80 IPR004045 -
Psa4g3000 241 Gene3D Glutaredoxin 1 88 - -
Psa4g3000 241 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 86 IPR004045 -
Psa4g3000 241 SUPERFAMILY Thioredoxin-like 7 111 IPR036249 -
Psa4g3000 241 SFLD Main.3: Omega- and Tau-like 3 229 IPR045073 -
Psa4g3000 241 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 229 IPR010987 -
Psa4g3000 241 SFLD Glutathione Transferase (cytosolic) 3 229 IPR040079 -
Psa4g3000 241 SUPERFAMILY GST C-terminal domain-like 88 220 IPR036282 -
Psa4g3000 241 Pfam Glutathione S-transferase, C-terminal domain 101 204 IPR004046 -
Psa4g3000 241 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 220 - -
Psa4g3000 241 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 220 IPR045073 -
Psa4g3000 241 Gene3D - 89 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3000 Psa-Chr4 243848300 243850690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3000 6 229 Glutathione S-transferase Gene Family AT1G10360 55.111 5.15e-86 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3000 K00799 - cam:101508281 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3000 4 243848300 243850690 Psa4g3000 4 243848300 243850690 ECH