Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2982 ATGACTTTCAACATGATCCTTATTTTGTGTCTTGTTTTTCACATTCTTTCAACACAAATCTGTTATTGTCAAAATAATTCTCCTCAAAACATAGAAACTTTCTACCAAAATGAAACAACTTCAGTGTCATCACCACCACCAAAGGAACAACCTTCATCACCACCACCACCTCGAGAACCAATCGCGGTATCGAAAAGTAGTTCGTCGAATGGTAAGATAGCGAAAGCAGTGGCGGCAACTGCAGCAAGCACTATAGTTATTTGTGGTTTGATTTTCATTTTAGTAAAAAGGTGTTTGAGAAAAAGAAAGAGAAACAACATTGCTTCTGATGGTGATAGGCAACAAGGTGTTGTGCCGAAAGGGGATGTTTTCGAAAAGATTGATGGAAATGTGAGAGGGTTGATTGTTGATGAGGATGGTTTGGATGTGATATATTGGAGAAAACTTGAAGAGAAGAATTCTAACAAGGATCTTTATAAGGATATCATCTTGAATAGTCCGAGAAACAAAGTCGAAGAAGTTAGTCATGAAGAAGAGAATCAAGAGAAAAAATCTAAGTACATTCAAGAAACTCCTCTTCTTAAAGGACAATCTTCATCTTCACATATAATTCAAGAAGAGGATGATTTATATAGAATTCCAAGAATTCAATCTCAACCATCCAATAATGAAGGATATGTTAAAAAGGGTGTTGAAAAACATGAATTTCAATCTCAACCATCCGTTTTGCCATCAATAGTTGCAACACCGCCACCTCCTCCTCCTCCAATGAAGGCAGTACCTCCACCACCTCCTCCGATGAAGGCAGCACCACCGCCACCTCCTCCGATGTCATCATCGAAAGCTATCTCCAAGAACAATCAAAGAAACTCTTTAGGGAAAGGTGTGGAAGAATCCAACAATGATCAAGTGAAGTTGAAGCCTTTGCATTGGGATAAAGTGAATACTAATGCTGCTGATCATTCCATGGTTTGGGACAAAGTCGATCGCGGCTCGTTCAGGGTTGATCAAAATCTTATGGAAGCTCTCTTTGGTTACGTCGCAACCAATCGAATGTCGCCTAAACAAAAGACTGACTCAACAAGTCCAAGCAATGATGGCTCAACAAAAAAATTCCTTCTTGATCCTAGAAAATCACAAAACATTGCTATTGTTTTGAAATCACTAGCCGTCTCGCGAGACGAAATTCTTGATGCGCTCATAGAAGGAAAAGGCCTAAATGGAGACACAATTGAAAAGCTTTCAAGAGTTTCACTAACACAAGAAGAGAAATCACTTATCCTTCAATACAAAGAAGATCCATCAAGACTTGCTGCAGCAGAATCATTCCTACATCACATGCTTAAAGCCATTCCTTCCGCGTTTAACCGCTTGAACGCGATGCTATTCAAGCTGAACTACGACTCGGAGGTCGTGGAAATCAATGATTCTTTGCAGACTATTGAATTCGGATGTAAAGAGCTTAGAAGTCAAGGACTTTTCTTGAAGCTTCTAGAAGCGGTTCTTAAGGCCGGGAACCGAATGAACGACGGAACTTCTAGAGGTAATGCCCAAGCTTTTAACTTGAATTCATTAAGGAAACTCAATGATGTGAAAAGCAACAATGGAAAAACCACATTACTTCACTTTGTTGTCGAAGAAGTTGTTCATTCAGAAGGAAAACGCGCTGTTCTTAACCGAAATAACAGCCTAACCCGAAACATGAGTCGAAAGAGAAGCAGGAACATGAATGGAAACATCGAAACAAATGTTGTTTCGGATGAAAAAAGAGAAAGGGAATGCACAATGTTAGGATTATCAATTGTGGGAGGAATAAGTTCTGAATTCAACAATGTTAAAAAAGGAGCAAATTTGGATTATAAAAGTTTAGTTGAATCAATTTCATCACTATCTATGAGACTAATTGAAATTCAAGAACTTGTTTCACAATGTGAGAGTGGTGAAAGAGGAAACTTTGTGAAAGAAATGAATTATTTTATTGGAAATGCTAAGGAAGAACTGAAACTTGTTAGGGAGAAAGAAACAATTGTGTTGCAAATTCTTAGTAAAACAACACAATATTATGAATGTGGAGGTTCAAAAGAGAAAGAAGAAAAAAATCTTCAATTATTTGGTATAGTTAAAGACTTTTTGGGAATGGTCGATCAAGTTTGCATTGAAATTGAACGTGACTTGCAAAAAAAAGAATCCTAA 2193 0.3767 MTFNMILILCLVFHILSTQICYCQNNSPQNIETFYQNETTSVSSPPPKEQPSSPPPPREPIAVSKSSSSNGKIAKAVAATAASTIVICGLIFILVKRCLRKRKRNNIASDGDRQQGVVPKGDVFEKIDGNVRGLIVDEDGLDVIYWRKLEEKNSNKDLYKDIILNSPRNKVEEVSHEEENQEKKSKYIQETPLLKGQSSSSHIIQEEDDLYRIPRIQSQPSNNEGYVKKGVEKHEFQSQPSVLPSIVATPPPPPPPMKAVPPPPPPMKAAPPPPPPMSSSKAISKNNQRNSLGKGVEESNNDQVKLKPLHWDKVNTNAADHSMVWDKVDRGSFRVDQNLMEALFGYVATNRMSPKQKTDSTSPSNDGSTKKFLLDPRKSQNIAIVLKSLAVSRDEILDALIEGKGLNGDTIEKLSRVSLTQEEKSLILQYKEDPSRLAAAESFLHHMLKAIPSAFNRLNAMLFKLNYDSEVVEINDSLQTIEFGCKELRSQGLFLKLLEAVLKAGNRMNDGTSRGNAQAFNLNSLRKLNDVKSNNGKTTLLHFVVEEVVHSEGKRAVLNRNNSLTRNMSRKRSRNMNGNIETNVVSDEKRERECTMLGLSIVGGISSEFNNVKKGANLDYKSLVESISSLSMRLIEIQELVSQCESGERGNFVKEMNYFIGNAKEELKLVREKETIVLQILSKTTQYYECGGSKEKEEKNLQLFGIVKDFLGMVDQVCIEIERDLQKKES* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2982 730 MobiDBLite consensus disorder prediction 352 372 - -
Psa4g2982 730 Pfam Formin Homology 2 Domain 299 714 IPR015425 -
Psa4g2982 730 MobiDBLite consensus disorder prediction 280 298 - -
Psa4g2982 730 MobiDBLite consensus disorder prediction 352 369 - -
Psa4g2982 730 PANTHER FORMIN-RELATED 5 729 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Psa4g2982 730 MobiDBLite consensus disorder prediction 170 205 - -
Psa4g2982 730 Gene3D Formin, FH2 domain 316 730 IPR042201 -
Psa4g2982 730 MobiDBLite consensus disorder prediction 265 302 - -
Psa4g2982 730 SUPERFAMILY Formin homology 2 domain (FH2 domain) 309 728 - -
Psa4g2982 730 MobiDBLite consensus disorder prediction 37 67 - -
Psa4g2982 730 MobiDBLite consensus disorder prediction 47 61 - -
Psa4g2982 730 ProSiteProfiles Formin homology-2 (FH2) domain profile. 296 730 IPR015425 -
Psa4g2982 730 PANTHER FORMIN-LIKE PROTEIN 5 729 - -
Psa4g2982 730 MobiDBLite consensus disorder prediction 170 189 - -
Psa4g2982 730 MobiDBLite consensus disorder prediction 265 279 - -
Psa4g2982 730 SMART it6_source 296 729 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2982 Psa-Chr4 241112892 241116197 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2982 4 729 FH2 protein (formin) Gene Family AT1G70140 43.373 7.57e-179 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2982 - - vun:114178801 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2982 4 241112892 241116197 Psa4g2982 4 241112892 241116197 ECH