Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2943 ATGGCTTCTTCAATGAGGATCTCAAGGTTCATCTCTAGATCAGTTTCTTCTTCTTCAGTGTTCTCTCGAGGTTTGAGTTCAAGAGTCTGTAAATACAGCACCAATGCATCTTCCATCGAAGAACCAATCAAACCAACGTTTCATGTTGATCATACTCAGCTTTTAATTGATGGAAAATTTGTAGATTCTGCCTCTGGTAAAACATTTCCAACGTTGGATCCAAGAAATGGCCAAGTGATTGCTCATGTTTCTGAAGGTCAACATGAAGATGTCGATCGAGCTGTTGCAGCTGCACGCAAAGCATTTGATCATGGACCATGGCCTAAGATGACAGCCTATGAAAGGCAAAGGATATTGTTACGAGCTGCTGATTTGCTTGAAAAGCATAATAATGAGCTTGCAACACTTGAGACTTGGGATAATGGGAAGCCATATGAACAAGCTGCTGAGATCGAAGTTCCAATGCTGACCCGCTTAATTCGGTACTATGCTGGTTGGGCAGATAAAATTCATGGTCTCACAGTTCCAGCTGATGGGCCACATCAGGTGCATACATTGCATGAACCAATTGGTGTTGCTGGTCAGATCATTCCATGGAATTTTCCTCTTCTCATGTTTGGTTGGAAGGTCGGACCGGCATTGGCATGCGGCAACACTATTGTTCTAAAAACATCTGAGCAGACACCATTGTCTGCTTTGTATGCAGCAAAACTATTTCATGAGGCTGGACTTCCTCCTGGTGTTTTGAATATAGTATCCGGCTTTGGTCCAATAGCCGGTGCCGCTCTTGCTAGTCATATGGATGTGGATAAGATTGCATTTACAGGTTCAACTGCTACTGGAAAAATTATCCTTGAACTAGCTGCTAAAAGCAATTTGAAGGCTGCAACTTTGGAGCTTGGTGGAAAATCTCCCTTTATTGTATGTGAAGATGCTGATGTAGATCAGGCTGTTGAGTTAGCACACTTCGCCTTGTTCTTCAACCAGGGACAATGTTGCTGTGCTGGCTCTCGAACGTTTGTACATGAAAGCGTGTATGATGAGTTTGTTGAGAAAGCGAAGGCCCGCGCATTGAAACGTGTTGTTGGAGATCCATTCAAGTCAGGAGTAGAGCAAGGTCCTCAGATTGATTCAAAACAATTTGAAAAAATACTCAAGTATATTAACTCCGGTGTTGAAAATGGCGCTACACTGGAAGCTGGCGGAGAAAAGATCGGTAACAAGGGCTTCTATATACAGCCAACTGTCTTCTCAAACGTTCAGGACGAAATGCTGATTGCAAAGGATGAGATTTTCGGTCCAGTGCAAACCATATTGAAATTCAAGGAGATTGATGAGGTTATTCGAAGAGCGAATAACTCGCGTTTTGGCCTTGCTGCGGGGATTTTTACAAAGAGCATAGACACTGCTAATACTTTGACTAGAGCATTGAGAGTTGGATCAGTTTGGGTGAATTGCTATGATGTATTTGATGCTACAATTCCTTTTGGTGGATATAAAATGAGTGGACAAGGAAGAGAAAAAGGAGAGTATAGTCTTAAGAACTACTTGCAAGTGAAAGCTGTTGTTACTCCTTTGAAGAACCCAGCATGGCTTTGA 1599 0.4246 MASSMRISRFISRSVSSSSVFSRGLSSRVCKYSTNASSIEEPIKPTFHVDHTQLLIDGKFVDSASGKTFPTLDPRNGQVIAHVSEGQHEDVDRAVAAARKAFDHGPWPKMTAYERQRILLRAADLLEKHNNELATLETWDNGKPYEQAAEIEVPMLTRLIRYYAGWADKIHGLTVPADGPHQVHTLHEPIGVAGQIIPWNFPLLMFGWKVGPALACGNTIVLKTSEQTPLSALYAAKLFHEAGLPPGVLNIVSGFGPIAGAALASHMDVDKIAFTGSTATGKIILELAAKSNLKAATLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFVEKAKARALKRVVGDPFKSGVEQGPQIDSKQFEKILKYINSGVENGATLEAGGEKIGNKGFYIQPTVFSNVQDEMLIAKDEIFGPVQTILKFKEIDEVIRRANNSRFGLAAGIFTKSIDTANTLTRALRVGSVWVNCYDVFDATIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2943 532 CDD ALDH_F2BC 49 524 - -
Psa4g2943 532 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 326 337 IPR016160 GO:0016491
Psa4g2943 532 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 522 IPR016162 GO:0016491
Psa4g2943 532 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 20 532 - -
Psa4g2943 532 SUPERFAMILY ALDH-like 46 526 IPR016161 GO:0016491
Psa4g2943 532 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 20 532 - -
Psa4g2943 532 Pfam Aldehyde dehydrogenase family 60 522 IPR015590 GO:0016491
Psa4g2943 532 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 493 IPR016163 GO:0016620
Psa4g2943 532 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 298 305 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2943 Psa-Chr4 236562622 236565732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2943 3 532 Aldehyde Dehydrogenase Gene Family AT3G48000 74.302 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2943 K00128 - gmx:100777399 911.368