Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2929 ATGCCGTTCGGTTTGGTCTCGGCTTGGAACAAGCGGCGACGAAGCAAGTCTCAAGATCATTCCGACCCTTGGATTTATAAACCTGCAGAGTTTTGGCAACTTGAAGATCAATCACCGCAATCTACTAATAGGATGCATGGATCATCTGTTTTCACACTCAAGGAAATGGAAGATGCAACTTGTTCATTCAGTGATGATAATCTTGTTGGAAAAGGAGGATTTGGTAGGGTCTATAGAGGCATTTTGAAGTCAGGAGAGGTTGTAGCTATCAAGAAAATGGAGTTGGAAGCAATTAAAGCGGCAGAGGGAGAGCGCGAATTTCGCGTAGAAGTTGACATATTGAGTTTGCTAGACCATCCAAATCTTGTTTCTTTGATAGGTTATTGTGCTGATGGAAAGCATAGATTCTTAGTATATGAGTATATGCATAATGGAAACCTGCAAGATCATTTGAATGGGATGAGGGAAAGAAAAATGGATTGGCCTCAAAGATTAAGAGTGGCATTAGGAGCTGCAAAAGGCCTTGCTTATCTCCACTCAAGTTCTTGCGTTGGAATTCCTATTGTTCATAGAGATTTCAAATCCACCAATATTCTTTTAGATACCAATTTTGAAGCAAAGATATCTGATTTTGGGTTCGCAAAGCTAATGCCAGAAGAACACGAAATACACGAAACAGCCAAAGTACTTGGTACATTTGGCTATTTTGACCCTGAGTATACATCGACGGGAAAGTTGACGCTACAAAGTGATGTTTACGCTTTTGGTGTTGTTCTTCTAGAACTTTTGACAGGACGTCAAGCTATAGATCTAAACCAAGGTCCAAATGATCAATACCTTGTACTACAAGTAAGGCACTTACTGAATAACCACAAGATGCTCCGTAAGTTGATTGATCCAGAGATGACTAGAAATTCTTACACTTTTGAATCAATATTCATGTTTGCGAATCTTGCATCACAATGTGTTCGTCTTGAGAGTCATGTGAGGCCTTCAATGATAGATTGTGTCAAAGAAATTCAAATGATTATCTATACAAATGCAAAAGGGTTGGGAATGGTTATGCATAGTTTGAGAATGCTCTAG 1086 0.3932 MPFGLVSAWNKRRRSKSQDHSDPWIYKPAEFWQLEDQSPQSTNRMHGSSVFTLKEMEDATCSFSDDNLVGKGGFGRVYRGILKSGEVVAIKKMELEAIKAAEGEREFRVEVDILSLLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGMRERKMDWPQRLRVALGAAKGLAYLHSSSCVGIPIVHRDFKSTNILLDTNFEAKISDFGFAKLMPEEHEIHETAKVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRQAIDLNQGPNDQYLVLQVRHLLNNHKMLRKLIDPEMTRNSYTFESIFMFANLASQCVRLESHVRPSMIDCVKEIQMIIYTNAKGLGMVMHSLRML* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2929 361 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 360 - -
Psa4g2929 361 CDD STKc_IRAK 69 341 - -
Psa4g2929 361 PANTHER OS01G0750732 PROTEIN 1 360 - -
Psa4g2929 361 ProSiteProfiles Protein kinase domain profile. 63 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2929 361 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Psa4g2929 361 SUPERFAMILY Protein kinase-like (PK-like) 39 346 IPR011009 -
Psa4g2929 361 Pfam Protein kinase domain 64 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2929 361 Gene3D Transferase(Phosphotransferase) domain 1 142 352 - -
Psa4g2929 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Psa4g2929 361 Gene3D Phosphorylase Kinase; domain 1 30 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2929 Psa-Chr4 234968513 234975590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2929 46 344 Receptor kinase-like Gene Family AT3G58690 45.066 2.51e-87 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Psa4g2929 Pkinase 3.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2929 - - gmx:100820613 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2929 4 234968513 234975590 Psa4g2929 4 234968513 234975590 ECH