Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2913 ATGGCTTCTTCCATCAAAATCTCAAGGCTCATTTCTCGCTCAATTTCTTCTGCTTCTTCTTCTACCTCTTTGTTTTCTCGAGGTAGGAATGGTGGTTACCCGGGTGGATTACTAGCTAAATATAGCACGGCTGCTGTTGTTGACGAACAGCCGATTAAACCATCAGTGCAAGTAGAGCATACTCAGCTCTTAATTGATGGAAAGTTTGTAGATGCTGCTTCTGGTAAAACATTTCCAACATTGGATCCAAGGACAGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATATTGATAGGGCTGTTGCAGCTGCGCGCAAAGCATTCGATTTTGGGCCGTGGCCTAGGATGACAGCCTATGAAAGGCAAAAGATAATGTTGCGAGCTGCTGATCTGATTGAAAAGCATAACGATGATATTGCAGCACTTGAGACTTGGGATAATGGGAAGCCATATGAACAGTCTCGTCAAGTGGAAATTCCAATGTTGGTTCGCCTAATTCGGTATTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGACGGTTCCTATCACGTGCAGACCTTGCATGAACCGATTGGTGTTGCTGGTCAGATCATTCCATGGAACTTCCCTCTTCTCATGTTTGTAGGACCGGCATTGGCATGCGGTAACACTGTCGTTCTGAAAACAGCTGAGCAGACACCACTGTCTGCGTTGTATACAACGAGACTATTTCATGAGGCTGGACTTCCTCCTGGTGTGTTGAATATAGTATCTGGCTTTGGTCCAACTGCAGGTGCTGCTCTTGCTAGTCACATGGATGTCGATAAGGTTGCATTCACTGGTTCGACTGCTACCGGAAAGGTTATCCTTCAACTGGCAGCTCAAAGCAATCTTAAACAAGTAACTTTGGAGCTTGGTGGGAAATCTCCGTTTATTGTATGCGAAGATGCTGACGTAGATCAGGCTGTTGAGCTAGCACATTTTGCCCTATTCTTCAATCAAGGACAATGTTGCTGTGCCGGGTCTCGTACATTTGTACATGAACGTGTGTATGACGAGTTTGTCGAGAAAGCTAAGATCCGCGCTTTGAACCGTTCTGTTGGAGATCCATTCAAGTCAGGAATAGAACAAGGTCCTCAGATTGATGCAAAGCAATTTGAGAAAATATTGAGGTATATTAGATCTGGTGTCGAAACTGGGGCTACACTTGAAACTGGAGGAGAAAGGCATGGCAGCAAGGGCTTCTATGTTCAGCCTACTGTCTTCTCAAATGTTCAGGATGACATGCTGATTGCAAAGGAAGAGATATTTGGTCCAGTACAATCCATATTGAAATTCAAGAACATTGAAGAGGTAATTCAAAGAGCAAATAATTCAAACTATGGTCTTGCAGCAGGGATCTTCACAGAAAACTTAAACACTGCTAATACTTTGACAAGAGCACTGAAAGTTGGAACAGTTTGGGTAAACTGCTCAGAAAACTTAAACACTGCTAATACTTTGACAAGAGCACTGAAAGTTGGAACAGTTTGGGTAAACTGCTTTAATACATATGATGCTGCAATTCCTTTTGGTGGATATAAGATGAGTGGACAAGGCAGAGAAAAAGGAGAATACAGTATTAAGAACTACTTGAATGTGAAAGCTGTTGTTACTCCCTTGAAGAATCCAGCATGGCTTTGA 1686 0.433 MASSIKISRLISRSISSASSSTSLFSRGRNGGYPGGLLAKYSTAAVVDEQPIKPSVQVEHTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEGHSEDIDRAVAAARKAFDFGPWPRMTAYERQKIMLRAADLIEKHNDDIAALETWDNGKPYEQSRQVEIPMLVRLIRYYAGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLLMFVGPALACGNTVVLKTAEQTPLSALYTTRLFHEAGLPPGVLNIVSGFGPTAGAALASHMDVDKVAFTGSTATGKVILQLAAQSNLKQVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKIRALNRSVGDPFKSGIEQGPQIDAKQFEKILRYIRSGVETGATLETGGERHGSKGFYVQPTVFSNVQDDMLIAKEEIFGPVQSILKFKNIEEVIQRANNSNYGLAAGIFTENLNTANTLTRALKVGTVWVNCSENLNTANTLTRALKVGTVWVNCFNTYDAAIPFGGYKMSGQGREKGEYSIKNYLNVKAVVTPLKNPAWL* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2913 561 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 523 551 IPR016162 GO:0016491
Psa4g2913 561 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 494 IPR016163 GO:0016620
Psa4g2913 561 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 307 IPR016162 GO:0016491
Psa4g2913 561 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 36 493 - -
Psa4g2913 561 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 494 561 - -
Psa4g2913 561 SUPERFAMILY ALDH-like 493 555 IPR016161 GO:0016491
Psa4g2913 561 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
Psa4g2913 561 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 495 522 IPR016163 GO:0016620
Psa4g2913 561 SUPERFAMILY ALDH-like 56 493 IPR016161 GO:0016491
Psa4g2913 561 CDD ALDH_F2BC 58 553 - -
Psa4g2913 561 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
Psa4g2913 561 Pfam Aldehyde dehydrogenase family 69 493 IPR015590 GO:0016491
Psa4g2913 561 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 494 561 - -
Psa4g2913 561 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 36 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2913 Psa-Chr4 233771357 233774917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2913 6 561 Aldehyde Dehydrogenase Gene Family AT3G48000 71.735 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2913 K00128 - gmx:100777399 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2913 4 233771357 233774917 Psa4g2913 4 233771357 233774917 ECH