Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2910 ATGGCATCAAGATCTTATGCTAATCTTTTGGACTTAGCTGGTGGAGGAGACTTGCTTGATATTCCTCACACCCCAAGAACTCTTCCAAGGGTTATGACTGTTCCTGGAATTATTTCTGACCTGGATGGTGAATCAGACGTTAGTTCTTCTGGCTGTCGGGAGCGGAAAATCATTGTGGCAAACATGTTGCCTCTGCAGGCTAAAAGAGATATTGATACTGCTAAATGGTGTTTCAGTTGGGATGAAGATTCAATTCTATTACAATTAAAAGATGGTTTTTCTTCTGATACTGAGGTAATCTACGTGGGTTCTCTCAAAGCTGAGATAGATGCTAGTGAGCAGGATGAAGTTGCTCAGAGATTATTGGATGACTTCAATTGTGTGCCTACCTTTCTACCCCATGATCTGCAGAAAAAGTTCTATCTTGGTTTTTGTAAGCAGCAGCTCTGGCCTCTGTTCCATTACATGCTACCTATATGCTCAGATCATGGTGATCGCTTTGACCGTGTGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCAGACAAAGTCATGGAAGTGATTAATCCTGATGATGATTTTGTTTGGGTTCATGATTACCACTTGATGGTTTTGCCTACTTTCTTGAGGAAACGATTTAATCGAGTTAAACTTGGGTTCTTTCTTCACAGTCCTTTCCCATCTTCTGAAATTTACCGAACTTTGCCTGTAAGGGATGAGATTCTGAAGGGATTGTTGAATTCGGATTTAATTGGTTTTCATACATTTGATTATGCTCGCCACTTTCTTTCATGCTGCAGTAGAATGCTAGGTCTGGATTATGAATCTAAGCGAGGGCATATAGGACTAGATTACTTTGGCCGCACTATATTTATCAAAATTTTGCCCGTAGGCATTCACATGGGTAGGCTTGATTCTGTATTAAATCTTCCTTCTACATCCTCTAAGCTAAAAGAGATTCAGGAAGAGTTTAAGGATAGGAAAGTTATTCTTGGTGTTGACGACATGGATATTTTTAAGGGTATCAATCTGAAATTTCTAGCAGTGGAGCAGTTGCTGCAGCAGAATCCAGATTTGCAGGGTAAAGTTGTCCTTGTTCAAATTGTAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGAAGGAAGCATATCTAATTGCCCAGAGGATCAATGATACTTATGGTTCTAGTCATTATCAACCAGTCATTATCATTGACCGCCCTGTTCCTCGCTTTGAGAAGAGTGCCTATTATGCTGTAGCTGAGTGCTGCATTGTCAATGCTGTGAGAGATGGGATGAACTTAGTCCCGTACAAATATATTGTCTGCAGACAGGGAACTGCAAAGCTGGATGAAGCTGTGGGTAGACAGAGTGATTCTCCTCGTACAAGCATGCTTGTTGTGTCTGAGTTCATTGGCTGTTCACCTTCTCTGAGTGGGGCTATCAGGGTCAATCCCTGGGATATAGATGCAGTTGCTGATGCTCTGAATTTGGCTCTCACTATGAGAGATTCAGAGAAAAAGTTGCGCCATGAGAAACACTATCGTTATGTTAGTTCTCATGATGTGGCATATTGGGCACGCAGTTTTATGCAGGATTTGGAGAGAGCTTGCAAAGATCATTACACTAAAAGGTGCTGGGGAATTGGTTTGGGCTTGGGATTCAGAGTTATTTCTCTTTCTCATGGTTTTAGGAAGCTGTCCATTGACCATATTGTATCAGCTTACAAAAGAACCAGTAGAAGGGCCATCTTTCTTGATTATGATGGCACTATTGTACCTCAAACTTCCATTAATAAAACCCCCAGCCCTGAAGTCATATCTGTGCTTAATGCTCTGTGTAACGATACCAAGAATATTGTGTTCATTGTTAGTGGAAGGGCAAGAGATTCTCTGAGTGACTGGTTTACTTCGTGCAAAATGCTGGGACTTGCAGCTGAACATGGGTACTTTCTAAGGTGGAATAGCGACTCCGAATGGGAAACCAGTCACTTGTCTGCGGACCTTGATTGGAAACAGATAGTGGAGCCTGTCATGCAGTCATATACAGAAGCAACTGATGGATCTAATATTGAAATTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCCTGCCAAGCCAAAGAATTGTTGGATCACTTGGAAAGCGTTCTTGCTAATGAACCGGCACTTGTTAAGAGGGGCCAACATATTGTTGAAGTTAAGCCACAGGGAGTGACCAAAGGGTTGGTAGCTGAGAAAGTTCTTTTGAATATGGTTAATGGTGGTAATCCACCAGATTTCGTGATGTGCATTGGAGATGATAGGTCTGATGAAGACATGTTTGAAAGCATTTTGAGTACAGTCTCGTGCCCATCGTTACCATCCGCTCCGGAGATTTTTGCCTGCACTGTAGGAAGGAAGCCAAGCAAGGCCAAGTATTTTCTTGATGATACTACCGATGTTGTTAGGTTGCTTCAAGGCCTTGCCGCCTCATCAAATCCAAAGCCCAGGCATCATCATCATGCTCAATTCCAGGTTTCTTTCGAGAGCATAGTTTCTTAG 2580 0.4217 MASRSYANLLDLAGGGDLLDIPHTPRTLPRVMTVPGIISDLDGESDVSSSGCRERKIIVANMLPLQAKRDIDTAKWCFSWDEDSILLQLKDGFSSDTEVIYVGSLKAEIDASEQDEVAQRLLDDFNCVPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPICSDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLDSVLNLPSTSSKLKEIQEEFKDRKVILGVDDMDIFKGINLKFLAVEQLLQQNPDLQGKVVLVQIVNPARGSGKDVQEAKKEAYLIAQRINDTYGSSHYQPVIIIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTAKLDEAVGRQSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALNLALTMRDSEKKLRHEKHYRYVSSHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVISLSHGFRKLSIDHIVSAYKRTSRRAIFLDYDGTIVPQTSINKTPSPEVISVLNALCNDTKNIVFIVSGRARDSLSDWFTSCKMLGLAAEHGYFLRWNSDSEWETSHLSADLDWKQIVEPVMQSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPALVKRGQHIVEVKPQGVTKGLVAEKVLLNMVNGGNPPDFVMCIGDDRSDEDMFESILSTVSCPSLPSAPEIFACTVGRKPSKAKYFLDDTTDVVRLLQGLAASSNPKPRHHHHAQFQVSFESIVS* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2910 859 Pfam Glycosyltransferase family 20 55 540 IPR001830 GO:0003824|GO:0005992
Psa4g2910 859 Gene3D - 716 850 IPR023214 -
Psa4g2910 859 Gene3D - 586 704 IPR023214 -
Psa4g2910 859 CDD HAD_TPP 588 829 - -
Psa4g2910 859 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 845 IPR001830 GO:0003824|GO:0005992
Psa4g2910 859 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 55 544 - -
Psa4g2910 859 TIGRFAM T6PP: trehalose-phosphatase 585 834 IPR003337 GO:0003824|GO:0005992
Psa4g2910 859 Pfam Trehalose-phosphatase 590 824 IPR003337 GO:0003824|GO:0005992
Psa4g2910 859 Gene3D Glycogen Phosphorylase B; 308 524 - -
Psa4g2910 859 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 588 789 IPR006379 -
Psa4g2910 859 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 845 - -
Psa4g2910 859 SUPERFAMILY HAD-like 587 835 IPR036412 -
Psa4g2910 859 CDD GT20_TPS 55 540 IPR001830 GO:0003824|GO:0005992
Psa4g2910 859 Gene3D Glycogen Phosphorylase B; 49 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2910 Psa-Chr4 232888948 232894619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2910 1 858 Trehalose Biosynthesis Gene Families AT1G23870 75.115 0.0 1380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2910 K16055 - gmx:100775779 1579.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2910 4 232888948 232894619 Psa4g2910 4 232888948 232894619 ECH