Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2877 ATGGAGCATGGTTTCATCTATTATAGACAGACCAAACATAGAGGAAATGTTGGATTATCTTCACAAGTTATGCCTGTCAAATATTTCTCACCTCAAAGAAATCGGGGACATCCTCCGCCGCTTCCACAGTTCATGAATTTGAATGTCAATCCCGTGGATAAGAGAACTGCTTTGACTTACATTGATAGCAATGGAAATTGGCACCGTGCAAGCAAAGGTGCTCTAGAGCAGATCATGAACCTGTGTAACCTTAAGGAAGATGCAAAGCGGAACATCCATGCTATTATTGACAAGTTTGCAGAGAAAGGTCCTCGTTCTCTTGCTGTTGCTAGACAGGAGGTTCCTGAGAAAACTAAAGAAAGCGCTGGTGGTCCTTGGCAGTTTGTTGGTTTGTTGTCACTGTTTGACCCCACCTAG 417 0.4341 MEHGFIYYRQTKHRGNVGLSSQVMPVKYFSPQRNRGHPPPLPQFMNLNVNPVDKRTALTYIDSNGNWHRASKGALEQIMNLCNLKEDAKRNIHAIIDKFAEKGPRSLAVARQEVPEKTKESAGGPWQFVGLLSLFDPT* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2877 138 PANTHER CALCIUM-TRANSPORTING ATPASE 47 137 - -
Psa4g2877 138 Gene3D - 33 135 IPR023299 GO:0000166
Psa4g2877 138 PANTHER PLASMA MEMBRANE ATPASE 47 137 - -
Psa4g2877 138 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 50 137 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2877 Psa-Chr4 230173369 230173785 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2877 50 137 Primary Pumps ATPases AT2G24520 77.273 2.38e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2877 K01535 - gmx:100806580 164.081