Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2872 ATGAAGAAACACAACAATCCCACAAGAACAAAAGAAATTCTTATAGATGAATCTCCATTACTACAAAGTGAAGTTGATGTTCAACATGATGAAGATGGATCCAAATCCAATTCTAACAACAATGAATCATCATCAGCATCATTTACAGGTTCTGTATTCAATTTATCAACCACCATAATTGGTGCTGGAATCATGGCTTTGCCAGCAGCCATGAAAGTTTTGGGTCTAACAATTGGTATTGTTTCCATCATCTTCCTTGCTTTTCTTGCTCATACCTCTTTGGAAATTCTCATGAGGTTTAGTAAAGTTGCTAAGGCTCAGTCTTATGGTGATGTTATGGGGGTTGCTTTTGGAAGTGCTGGAAGATTGGTTTTTCAGATTGCTGTTCTTTTGAACAACTTTGGTATCCTTGTTGTCTACACCATCATTATTGGTGATGTACTGTCTGGAACATCTTCATCTGGAACTCATCATTTCGGTGTACTCGAAGGATGGTTCGGCGAACACTGGTCGACCGGGCGGACTTTTGTTCTTTTCGTGACAACCCTTGTTGTATTTGCGCCATTAGGATTCTTTAAAAGAATAGATTCACTGAGATATACTTCTGGTTTAGCAGTGGCTCTGGCAATTGTTTTTCTAGTCATAACGGCGGGAATCACGATCGTTAAATTGTTCAATGGAAGTATAGAGAGTCCTAGGTTGCTTCCTAATGTTACTGATATGTCATCTATTTGGAATCTCTTCACAGCAGCTCCGGTTCTTGTGACAGCATTTGTTTGTCATTACAATGTGCATACAATAGACAATGAACTAGGAGACTCTTCATCTATACAACCAGTTATATCTGCATCACTGGTTTTATGTTCAAGTATATACATTCTCACTGCTTTATTTGGATTTCTACTATTCGGTGAGTCGACTCTCGATGATGTACTGGCCAACTTTGATACTGATCTCGGCGTCCCTTATAGCCATGTGCTTAACGACATCGTTCGAATCAGCTATGCTCTTCATCTCATGCTTGTTTTCCCAGTTATCTTCTTTTCGCTTCGGTTCAATTTGGACGATCTTGTCTTTCCCTCAGCAGAGTCACTCGAATCAGATAATTGTAGATTTTCGTTGATCACTACTGGACTCATTTCTTTGCTCTATGTGGCTGCAAATTTTGTACCGAGCATTTGGGATGTTTTTCAATTCACCGGTGCAACTGCTACTGTTTGCCTCGGGTTTATTTTCCCGGCCGCAATTGCTCTGAGGGATCCACATAGCATTGCAACAAAGAAGGACAAGATTTTATCAGTTGTCATGATTGTTCTGGCTGTGTTTTCGAATGTTGTGGCGATTTACAGCAATGCCGATGCTTTGTTCAGAAAACACCAAAGTAACTCAAATTTAGAGAGAAACTTTGCTTGGCCTATGAAGATCCAGCAATAG 1434 0.3996 MKKHNNPTRTKEILIDESPLLQSEVDVQHDEDGSKSNSNNNESSSASFTGSVFNLSTTIIGAGIMALPAAMKVLGLTIGIVSIIFLAFLAHTSLEILMRFSKVAKAQSYGDVMGVAFGSAGRLVFQIAVLLNNFGILVVYTIIIGDVLSGTSSSGTHHFGVLEGWFGEHWSTGRTFVLFVTTLVVFAPLGFFKRIDSLRYTSGLAVALAIVFLVITAGITIVKLFNGSIESPRLLPNVTDMSSIWNLFTAAPVLVTAFVCHYNVHTIDNELGDSSSIQPVISASLVLCSSIYILTALFGFLLFGESTLDDVLANFDTDLGVPYSHVLNDIVRISYALHLMLVFPVIFFSLRFNLDDLVFPSAESLESDNCRFSLITTGLISLLYVAANFVPSIWDVFQFTGATATVCLGFIFPAAIALRDPHSIATKKDKILSVVMIVLAVFSNVVAIYSNADALFRKHQSNSNLERNFAWPMKIQQ* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2872 477 Pfam Transmembrane amino acid transporter protein 46 450 IPR013057 -
Psa4g2872 477 MobiDBLite consensus disorder prediction 1 43 - -
Psa4g2872 477 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 12 461 - -
Psa4g2872 477 PANTHER AMINO ACID TRANSPORTER 12 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2872 Psa-Chr4 229339960 229342322 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2872 1 459 Amino Acid or Auxin Permease AAAP Family AT3G30390 60.784 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2872 K14207 - gmx:100778699 689.108