Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2870 ATGGACAGAAGCGGAAAAGTTCGTTCTATCTGGAACAGGCTTCTTCTAGAAGACGTTGTGGTTCCTGCTTTTGTGCATATGCTGCATTGTGTAAAGGAATTGTTAGGGCCAACAGACTTATACTATTCTTTATGGCCTATTGGTTCCTTTGAAGAGCCATGGAGCATTTTGGTTCAACAAATATACAGAAATGTTTGTAATGCTCCAGTTATCTATTCAGAATTGAATGGAGGAAGATGGGAATCACCGAGCGAAGCCTTTCTTCATGATGAAAAATTCACCAAAAGCAAGGACCTTGGTTTGGCTCTCATGCAATTGGGAATGCCAGTTGTGCATTTGCCCGATTCATTATTTGACTCTCTTTTAAAAAATAGTACCAGCAAGGTGGTTACTCCTGGTACAATACGTGATTTTCTTAGGGAATGTGAAACATCTAATTATTTGAGCAGATCATACAAGCTGCTATTATTGGAATATTGCCTTGAGGATCTGGTTGATGATGATGTTGGTAAAGGGGCTTACAATCTGCCCTTGCTTCCTTTAGCAAATGGCAGTTTTGCATCATTTTTGGGAGCATCAAAAGGTAATTCATACTTCATTTGTGATGAATTAGAGTACAAGCTGCTGCAGCCTATTTCGGACAGAGTGATTGATCGTAGCGTTCCTTCCAACATATTGAGCAGACTCTCTGGTGTTGCAATGTCTTCAAATACCAACCTTGCTCTTTTCAGTATTCATTATTTTGTTCAGTTATTCCCTGCATTTATGCCAGCTGACTGGAAATATAAAAGTAAAGTATTCTGGGATCCAGACTTGTGTCAAAAGCCAACATTATCATGGTTTTTGCTATTCTGGCAATATCTAGGAAAGCATAATGAAACATTGCAACTATTTAGTGATTGGCCAATTTTACCATCCACGTCTGGATTTCTTTTAAGACCTTCCAGACAATTGAAAATGATAAATGGAAGCAATCTCTCGAATGCAGTACAGGATATCCTTGTGAAAATTGGATGTAATATATTGAAGTCAAGTTATGTAGTTGAACATCCGGATTTATTCAATTATGTATCTGATGGAAGCAAGGTCACAGCTAGAATATCCTGCAGCAACCGTGACAGTAAAATCATGAGTGTGAAGAAAATGCAAGGAATGGAAAGAGCTGCAGATTCAGGAGAAACTCTTCAAATGGCTTCTGTTGGAGATCCATTCAAGTCAGGAATAGAACAAGGTCCTCAGATTGATGCAAAGCAATTTGAGAAAATATTGAGGTATATTAGATCTGGTGTTGAAACTGGGGCTACACTTGAAACTGGAGGAGAAAGGCATGGCAGCAAGGGCTTCTATGTTCAGCCTACTGTCTTCTCAAATGTTCAGGATGACATGCTGATTGCAAAGGAAGAGATATTTGGTCCAGTGCAATCCATATTGAAATTCAAGAACACTGAAGAGGTAATTCAAAGAGCAAATAATTCAAACTATGGTCTTGCAGCAGGGATCTTCACAGAAAACTTAAACACTGCTAATACTTTGACAAGAGCACTGAAAGGAGAATTAGGCTTGGCGCGTTTTTTCGCCGGACACACTTGTAAAATGTCTCATGGATAG 1608 0.3905 MDRSGKVRSIWNRLLLEDVVVPAFVHMLHCVKELLGPTDLYYSLWPIGSFEEPWSILVQQIYRNVCNAPVIYSELNGGRWESPSEAFLHDEKFTKSKDLGLALMQLGMPVVHLPDSLFDSLLKNSTSKVVTPGTIRDFLRECETSNYLSRSYKLLLLEYCLEDLVDDDVGKGAYNLPLLPLANGSFASFLGASKGNSYFICDELEYKLLQPISDRVIDRSVPSNILSRLSGVAMSSNTNLALFSIHYFVQLFPAFMPADWKYKSKVFWDPDLCQKPTLSWFLLFWQYLGKHNETLQLFSDWPILPSTSGFLLRPSRQLKMINGSNLSNAVQDILVKIGCNILKSSYVVEHPDLFNYVSDGSKVTARISCSNRDSKIMSVKKMQGMERAADSGETLQMASVGDPFKSGIEQGPQIDAKQFEKILRYIRSGVETGATLETGGERHGSKGFYVQPTVFSNVQDDMLIAKEEIFGPVQSILKFKNTEEVIQRANNSNYGLAAGIFTENLNTANTLTRALKGELGLARFFAGHTCKMSHG* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2870 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 379 520 IPR016163 GO:0016620
Psa4g2870 535 Pfam Aldehyde dehydrogenase family 393 516 IPR015590 GO:0016491
Psa4g2870 535 PANTHER - 1 371 - -
Psa4g2870 535 SUPERFAMILY ALDH-like 397 516 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2870 Psa-Chr4 229242387 229244347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2870 400 516 Aldehyde Dehydrogenase Gene Family AT3G48000 70.085 2.10e-52 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2870 - K17592 gmx:100789980 598.201