Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2859 ATGTCTATGGAGACGGAAGCTCAATGCATGATGGAAAAGAAAGCTTTGGCTATTGAGAAGATCAATGCATATATGCAAAAACTGAATTCTTTAGAAAAGAAATTCGATCCATTGTCTCATTTTACTTTGCATTGTGTGTTATCTCAAATTTCTCCACAATTTTATACCAAAGATGAGTTAACACAAATAGAGAAAATCAATCAAACCTCATGTCAACAAAGGAAAGTGAAAAAAGTACAAGTTAATAGCAAAAAAAGGTATCGTCCAGACAATGAAGATATCATCTCTGATGGGGAAAGAATAATGAAATCAAAGCCCGCAATTAGGAGGAAACCAATCATTCGTAAGGAAAAAACTCCTCTATCACCACCACCAGAATTGCCTAATCATGTTAATAACATGATCTCAGTGTTGAATGGTAATGATATTAAATATATCATGTGTAAGACATTGTTTATGTCTGATCTCAGCTATAACAACAATCGTCTTTCAATGCCAATTACACAAATTAGATCTGATTTTCTCACAGAAATAGAAAAGACAATCTTAGAAACAAGGGATCAAGAAGGAAAGCCGGTCGGTTTAAAAGTGATTGTGTTAGATCCTTATTTTAACGAATTCCCATTATCTTTGAAGAAGTGGAATATGAGCACTACTAGTGTTTACAATCTTGTTCAGGATTGGTCACCTGTATTATTGGAGAATAATTTTAAAGAGAATCAAAAACTTGATATTTGGTCATTTAGGGTCAACGATAACTTGTACTTTTTACTCGACACTAAGATGCAAGAAATTGAAAAAAGTGGAGAAAAGTCGAAGAATTCAATTGATATCAAAAATGAAAGATCGAAGAAATCAAAGGACGAGAATTGTGAACTTCAACCAGAAAGAGTTTGA 897 0.33 MSMETEAQCMMEKKALAIEKINAYMQKLNSLEKKFDPLSHFTLHCVLSQISPQFYTKDELTQIEKINQTSCQQRKVKKVQVNSKKRYRPDNEDIISDGERIMKSKPAIRRKPIIRKEKTPLSPPPELPNHVNNMISVLNGNDIKYIMCKTLFMSDLSYNNNRLSMPITQIRSDFLTEIEKTILETRDQEGKPVGLKVIVLDPYFNEFPLSLKKWNMSTTSVYNLVQDWSPVLLENNFKENQKLDIWSFRVNDNLYFLLDTKMQEIEKSGEKSKNSIDIKNERSKKSKDENCELQPERV* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2859 298 SUPERFAMILY DNA-binding pseudobarrel domain 145 266 IPR015300 -
Psa4g2859 298 Pfam B3 domain-containing protein At2g31720-like 128 232 IPR005508 GO:0003677
Psa4g2859 298 MobiDBLite consensus disorder prediction 266 298 - -
Psa4g2859 298 PANTHER DUF313 DOMAIN PROTEIN 4 272 - -
Psa4g2859 298 Coils Coil 14 34 - -
Psa4g2859 298 Gene3D - 136 271 IPR015300 -
Psa4g2859 298 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 4 272 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2859 Psa-Chr4 228307561 228309318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2859 138 258 B3 DNA Binding Superfamily AT1G05930 27.642 3.29e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2859 - - cam:101490092 224.942