Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2847 ATGGAGCTATTCCCAGCACAACCAGATTTATCATTGGAAATCAGTCTTCCAAACAACATACAATCATCATCATCATCATCATCAAAATGGAGAAGAAATTTAGATGATAAAGATGAAGAAGAAATGGATTTGAGATTTTGGAAAAAATCAAACACCTTTGATCTTTCTCTCACAAATCCATTATCTTCTTCTTCTACTGCTTCAAATTCAAATCTCAACAATCTTATAACAAACTCTTTTCAACCGTTTCATCAAAACCGAAACCATTACCAAAGAAGCCTAACTGAAGAACTAGGGTTTCTAAAACCTATAAGAGGAATTCCACTTTATCAAAATCCTCCTCCTCATCCTTCTGTTGCATTGTTTTCTCAACCATCCTTTGATGCTGCTGCTAATTCTTCAATTTCAACAACAACTTTTCATTCTCAAAATTTCATGAGATCAAAATTCTTACCGCGGTTTCCTTCAAAACGTAGCATGAGAGCTCCAAGGATGCGCTGGACTTCCACTCTTCATAATCGCTTTGTTCATGCCGTTGAGCTTTTAGGTGGCCATGAAAGAGCTACACCAAAATCAGTTCTTGAGCTTATGGATGTAAAGGATCTAACTCTATCACATGTTAAATCTCATTTGCAGATGTACAGGACTGTTAAATTACTGATAGAGCAGCATCACCAGATTAAGTTACCTGGAGAGATTATTACTACTAATCAAGATAAAGAAAATCATGGCTTTTGGAGCATTCTTCAAGGGAAGCTTGGTTGCATGGTAAGCCAGTGA 780 0.3654 MELFPAQPDLSLEISLPNNIQSSSSSSSKWRRNLDDKDEEEMDLRFWKKSNTFDLSLTNPLSSSSTASNSNLNNLITNSFQPFHQNRNHYQRSLTEELGFLKPIRGIPLYQNPPPHPSVALFSQPSFDAAANSSISTTTFHSQNFMRSKFLPRFPSKRSMRAPRMRWTSTLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRTVKLLIEQHHQIKLPGEIITTNQDKENHGFWSILQGKLGCMVSQ* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2847 259 Gene3D - 162 219 - -
Psa4g2847 259 SUPERFAMILY Homeodomain-like 160 216 IPR009057 -
Psa4g2847 259 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 163 216 IPR006447 GO:0003677
Psa4g2847 259 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 218 - -
Psa4g2847 259 Pfam Myb-like DNA-binding domain 164 215 IPR001005 -
Psa4g2847 259 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 218 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2847 Psa-Chr4 227654127 227656953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2847 1 218 G2-like Transcription Factor Family AT4G17695 42.324 6.67e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Psa4g2847 Myb_DNA-binding 5.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2847 - - aprc:113868756 231.106