Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2840 ATGACCGCTTTCTTTATCACACTCATCTCTCTTGTTTTCCTTATCATCACATTGAAGCTTTTCTTCCACACAACAACAAAGTTCAAGAACCTTCCACCGGGCCCACCATTTCTTCCAGTAATTGGAAACCTACATCAACTCAAACAACCACTCCACCATACTTTCCAAACCTTATCACAAAAATACGGCCAAATCTTTTCTCTCTGGTTCGGTTATCAGCCCGTCGTTGTTGTTTCATCGTCGAAAATAGCACAAGAATGTTTTACCAAACACGACATAGTTTTAGCAAACCGACCTGATTTTTTAGTCGGGAAATATATTAGCTACAATAACACCACCGTAGCACTAGCATCTTATGGTGACCATTGGCGCAATCTCCGCCGTATAGTAACAACCGAGCTACTCTCATCTCACCGTTTAAATTCCTTCTTGGAAATACGAAGAGACGAGATTATGAGATTAATCAAAAAGTTAACACAAGTGTCATACAATGATTTTTCAGAAGTTGAACTTACGTCGATGTTTTCAGAAATGACATTCAACACCATCATGAGAATGGTGTCAGGGAAACGATACTATGGTGATGATAGTGATGTGACTGATATTGAGGAAGCAAGGTTGTTTAGAAATATAATTAAAGAAATTCTGGGTTTAGGAGGAGCTAGCAACGTTAGTAATTATTTAAAGTTTTTAAGATCATCTCAACAGCAACAATCACAACCTGAATATTACACAGATCAAATCATCAAAGGACTTATTATGGTTATGCTAGTTGCAGGAACCGACACATCATCTGTAACTTTAGAATGGGCTATGTCCAATTTATTAAATAATCCAAATATATTAAAGAAGGCAAAAGATGAGATCGACACTCACATTGGACAAGATCACTTAGTAGATGAATGTGATATTTCAAAACTTTCTTATCTTCAAAGCATTGTGTATGAGACTCTTCGATTACATCCAGCTGCTCCATTATTAATGCCTCATTTGTCTTCAGAAGAATTTACAATTGAAAAATATAATATCCCACAAAGCACAATTTTAATGGTCAACTCATGGGCCATTCATAGAGATCCAAATTTGTGGACTGATCCTATATGTTTTAAGCCTGAGAGATTTGAGAAAGAAGGTGAGACAAATAAATTACTTTCATTTGGAATGGGAAGAAGGGCTTGTCCGGGGACAAACTTGGCCCAACGCACTGTGAGTTTGACTTTGGGCTTATTGATTCAGTGTTTTGAGTGGAAACGTATAGGAAAAGAAAAAATTGACATGACCGAAGGAAACGGAGTCACTGTGGCAAAAAAGATTCCCTTAAGAGTCATGTGCAAATTGTGTCATCCACTGAAGATTAAAGATGTTTTCTAA 1371 0.3705 MTAFFITLISLVFLIITLKLFFHTTTKFKNLPPGPPFLPVIGNLHQLKQPLHHTFQTLSQKYGQIFSLWFGYQPVVVVSSSKIAQECFTKHDIVLANRPDFLVGKYISYNNTTVALASYGDHWRNLRRIVTTELLSSHRLNSFLEIRRDEIMRLIKKLTQVSYNDFSEVELTSMFSEMTFNTIMRMVSGKRYYGDDSDVTDIEEARLFRNIIKEILGLGGASNVSNYLKFLRSSQQQQSQPEYYTDQIIKGLIMVMLVAGTDTSSVTLEWAMSNLLNNPNILKKAKDEIDTHIGQDHLVDECDISKLSYLQSIVYETLRLHPAAPLLMPHLSSEEFTIEKYNIPQSTILMVNSWAIHRDPNLWTDPICFKPERFEKEGETNKLLSFGMGRRACPGTNLAQRTVSLTLGLLIQCFEWKRIGKEKIDMTEGNGVTVAKKIPLRVMCKLCHPLKIKDVF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2840 456 Pfam Cytochrome P450 226 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2840 456 Pfam Cytochrome P450 32 202 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2840 456 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2840 456 PRINTS E-class P450 group I signature 268 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2840 456 PRINTS E-class P450 group I signature 311 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2840 456 PRINTS E-class P450 group I signature 352 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2840 456 PRINTS E-class P450 group I signature 383 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2840 456 PRINTS E-class P450 group I signature 393 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2840 456 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 386 395 IPR017972 GO:0005506|GO:0016705
Psa4g2840 456 Gene3D Cytochrome P450 19 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2840 456 SUPERFAMILY Cytochrome P450 32 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2840 456 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 235 - -
Psa4g2840 456 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 237 451 - -
Psa4g2840 456 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 237 451 - -
Psa4g2840 456 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 6 235 - -
Psa4g2840 456 PRINTS P450 superfamily signature 259 276 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2840 456 PRINTS P450 superfamily signature 312 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2840 456 PRINTS P450 superfamily signature 384 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2840 456 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2840 Psa-Chr4 227024577 227026363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2840 6 445 Cytochrome P450 AT4G37320 51.760 4.90e-180 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2840 K13260 - gmx:100811727 635.18