Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2816 ATGGGAGACGTGGCTAAGGATCTTACTGCCGGTACTGTTGGAGGGGCTGCACAACTAGTATGTGGACATCCCTTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACCACTACCTGGTCAGCTTCCCAAATATGCTGGTGCATTTGATGCCGTCAGACAGACAATAGCAGCCGAAGGTGCAGGCGGTTTATACAAAGGAATGGGCGCCCCACTCGCTACGGTAGCAGCCTTCAACGCAGTCTTGTTTACAGTAAGGGGGCAGATGGAATCACTATTGAGGTCACATCCAGGTGCCCCCCTCACAGTGAGTCAGCAGTTTGTTTGTGGAGCTGGAGCTGGTTTTGCTGTTTCCTTTCTTGCTTGCCCAACTGAATTAATCAAATGCAGGTTGCAAGCACAAAGCGCACTAGCTGAAACAGGAACAGCAGCTGTGGCTGTTAAGTATGGAGGACCAATGGATGTAGCCAGACAGGTTCTTCGGTCAGAGGGGGGCGTGAGAGGTCTTTTCAAAGGCCTGGTTCCCACAATGGCACGTGAGATACCTGGAAACGCGATAATGTTTGGCGTATACGAAGCATTAAAGCAACGGTTTGCAGGAGGTACCGATACCTCTGGCCTAAGCAGAGGCTCTCTGATTGTTGCGGGAGGTTTGGCAGGTGGTTCGTTCTGGTTCCTTATTTACCCGACCGATGTTATCAAAAGTGTGCTTCAAGTAGACGATCATAAGAACCCAAAATTCTCGGGTTCATTGGATGCTTTCAGAAAGATTAAATCTTCTGAGGGAATCAAAGGCCTATATAAGGGTTTTGGTCCTGCAATGGGAAGAAGTATTCCTGCAAATGCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTTTAGGATGA 894 0.4888 MGDVAKDLTAGTVGGAAQLVCGHPFDTIKVKLQSQPTPLPGQLPKYAGAFDAVRQTIAAEGAGGLYKGMGAPLATVAAFNAVLFTVRGQMESLLRSHPGAPLTVSQQFVCGAGAGFAVSFLACPTELIKCRLQAQSALAETGTAAVAVKYGGPMDVARQVLRSEGGVRGLFKGLVPTMAREIPGNAIMFGVYEALKQRFAGGTDTSGLSRGSLIVAGGLAGGSFWFLIYPTDVIKSVLQVDDHKNPKFSGSLDAFRKIKSSEGIKGLYKGFGPAMGRSIPANAACFLAYEMTRSALG* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2816 297 Gene3D Mitochondrial carrier domain 2 296 IPR023395 -
Psa4g2816 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Psa4g2816 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Psa4g2816 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Psa4g2816 297 Pfam Mitochondrial carrier protein 102 199 IPR018108 -
Psa4g2816 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Psa4g2816 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Psa4g2816 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
Psa4g2816 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Psa4g2816 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2816 Psa-Chr4 225177562 225180592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2816 22 291 Antiporters AT1G79900 33.818 1.84e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2816 K15109 - gmx:100787304 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2816 4 225177562 225180592 Psa4g2816 4 225177562 225180592 ECH