Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2804 ATGAATTTAACGTCAATGAACGATAACCTTGAAAGAGGAGCCGGGCCAAGGCGGTTCACCTGCAAAGAACTTAATTTTGCAACCAATAACTTTCCTAGTGATAGAAAGTTGGGTCAAGGTGGCTTTGGAGATGTTTATAAAAGTTACTTTTTTGATTTAGATATACCAATTGCTGTGAAGAAAATATCAAAGGGATCTAGACAAGGAAAGAAAGAATATGTAACTGAAGTTAAAGTGATCAGTCAGCTGAGACATAGGAATCTTGTGAAGTTGTTGGGTTGGTGCCATGACAAAGGAGAGTTTCTTCTTGTTTATGAGTTCATGCCAAATGAATGGGAGAGGTGTGTGGTACATAGAGATATCAAATCAAGTAATGTTATGTTAGATTCTAGTTTCAATGCTAAGCTTGGTGATTTTGGGTTGGCTAAATCAATGGATCATGAACTTGGGCCTCAAACAACCGGGCTAGCCGGAACATTTGGCTATCTAGCTCCGGAATATGTGAGTACAGGTAGGGCGAGTAAAGAGTCAGATGTATATAGTTTTGGGATGGTTGTCATGGAGATAGCCTGTGGAAAGAAAGCTACTGAAGTTATGAAGGAAAAAGGTGAAGAGAAGGGAATGATTGAGTGGGTTTGGGATCATTATGGAAGAGGAGAGCTACTTCTGGCCATGGATGAGAATTTGAAAAAGGATATTGATGAGAAACAAGTAGAGTGTTTGATGATTGTTGGATTATGGTGTGCTCATCCTGATGTGAATCTAAGACCATCAATTAGACAAGCTATTCAAGTGCTTAATTTTGAGGCTGCCTTGCCAAACCTTCCACCAAAGAGACCTGTTGCAACCTATCATGCTCCTACTCTTTTGGTAAGCTCAGTAGGAACTTCCATAACAACAAGCCTTCAGGATGGTCGTTAA 921 0.3996 MNLTSMNDNLERGAGPRRFTCKELNFATNNFPSDRKLGQGGFGDVYKSYFFDLDIPIAVKKISKGSRQGKKEYVTEVKVISQLRHRNLVKLLGWCHDKGEFLLVYEFMPNEWERCVVHRDIKSSNVMLDSSFNAKLGDFGLAKSMDHELGPQTTGLAGTFGYLAPEYVSTGRASKESDVYSFGMVVMEIACGKKATEVMKEKGEEKGMIEWVWDHYGRGELLLAMDENLKKDIDEKQVECLMIVGLWCAHPDVNLRPSIRQAIQVLNFEAALPNLPPKRPVATYHAPTLLVSSVGTSITTSLQDGR* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2804 306 Pfam Protein kinase domain 113 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2804 306 Pfam Protein kinase domain 34 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2804 306 PANTHER - 110 302 - -
Psa4g2804 306 PANTHER - 3 110 - -
Psa4g2804 306 ProSitePatterns Protein kinases ATP-binding region signature. 37 61 IPR017441 GO:0005524
Psa4g2804 306 Gene3D Transferase(Phosphotransferase) domain 1 111 275 - -
Psa4g2804 306 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 3 110 - -
Psa4g2804 306 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 110 302 - -
Psa4g2804 306 ProSiteProfiles Protein kinase domain profile. 31 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2804 306 Gene3D Phosphorylase Kinase; domain 1 16 107 - -
Psa4g2804 306 SUPERFAMILY Protein kinase-like (PK-like) 15 282 IPR011009 -
Psa4g2804 306 SMART serkin_6 31 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2804 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2804 Psa-Chr4 224308733 224309833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2804 2 306 Receptor kinase-like Gene Family AT5G10530 59.827 5.75e-143 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa4g2804 Pkinase 3.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2804 - - mtr:MTR_8g067690 506.908