Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2797 ATGAATAGCTATAAAATAGAAAAACAAGTTGTTTTCATGATCATATACTTATTATGGTTGTGTTGGAGTAAGCATACTAATGCAAAAGTTGATCATTTGAAGCCTGGCGATACTTTGGATATGTCATCCCCTTTATATTCTAAACAAGGCAAGTATTATCTTAGTTTTAGTTATGTTTTTGGCTCCAACGAGCACACATACTTGAGTATATTTTCTAGCGTTAATGTCCAAAATAATCTAGTGTGGCTCTATGATAGAAATCATCCAATATATCCAGATTCACAACTTCTATCACTAAGCCACTCTGGAGTGCTCAAAATTGAATCAAAATTTGGGAAACCAATAATCATTTACTCTTCACCACAGCCAATTAACAACACTGTGGCTACTATGTTAGATACAGGTAACTTTGTACTTGAACAATTTCACCCAAATGGAACAAAGACTTTGTTGTGGCAGACTTTTGATTATCCAATAAGCACTTTGATTCCAAATATGAAACTAGGCATTAACCGAAAAACGGGACATAATTGGTCACTAGTTTCTCCTATAACTAGTTCGATATGGGCTTCGGGTGAATTTAGTCTTGAATGGGAACCAATAGAAGGTGAACTGAACATTAAGAAACGCGACAAAGTGTATTGGAAAAGCGGAAAGCTTAGAAGTAATGGATTATTCGAGAACATTCCGACCAGTGTTCAACAAATGTATCGATACGTCATTGTCTCTAATATGGATGAAGACTCTTTTGCTTTCGAAACTACGGATAGGAATTATATCAGGTTTCCAGAATGGGTACTATTCGCGACGGGAAGGTTAATTAATAATGTAGGAGATATTGGAAATGCAGATATGTGTTATGGATATAATAGGGATGGGGGATGCCAAAACTGGGAGGACATACCAACTTGTAGGGAAGCTGGCCATGTGTTTGAAAAGAAGAATGCTATTGTAAGTTTAGACAATGCAACCTTTGAGGTTAATGCACTCTATGGTTATAATGACTGCAAGGAAAGTTGTTGGAGAAACTGTAATTGCACTGCATTCACAAAATATTATAATAATGGGACTGGATGTGTATTCTATTCATGGAATTTCACCAAAGCTCTTGATTTTGGCGACGAAATTAACCTTCATGCTTTGGTACAGCCAACAAAGATAGCCCACCATGGTAAAAAAAAGTGGATATGGATAAGTGCAATAACAGCGGCTATCTTATTCATAATATGCCCATTCATTTTATGCCTAGGAATAAAGAGAAAAAAGTATGAGTTCAAAAAGAAGAAAACTAAAATGCAAGATTTGGTAGCATCTAATGAATCATATGGTATCAAAGATCTTGAAGATGACGTTAAGGGACATGATATAAACATTTTTAACTATGCATCCATTTTGGAAGCAACCATGGACTTTTCTTCCGAAAACAAGTTAGGACAAGGAGGCTATGGACCTGTTTATAAGGGAATCTTACCAACAGGGCAAGAAGTTGCTGTAAAAAGACTTTCGAAAAATTCTGGACAAGGAATTGTGGAATTCAAAAATGAATTGGTACTGATTTGTGAGCTTCAGCACACAAATCTTGTACAACTTCTTGGCTGTTGCATGCATGAAGAAGAAAGGATTCTAATTTATGAATATATGCTAAACAAAAGCTTGGATTTCTATCTATTTGATTCAACAAAAAGGATGTTGCTAGATTGGAAAAAACGCTTCAACATTATAGAAGGAATTTCTCAAGGATTACTCTATCTTCATAAGTACTCAAGACTTAAAATCATTCATAGAGACTTGAAAGCTAGCAACATACTTCTTGATGAAAATATGAACCCAAAAATTTCTGATTTTGGTATGGCAAGAATGTTTACACAACAAGAATCCACAGTAAATACCAACAGAATTGTTGGGACGTATGGATATATGTCTCCGGAATACGCAATGGAAGGAATTTGTTCTACCAAGTCTGATGTTTATAGCTTTGGAGTGTTGCTACTAGAAATTGTTTGTGGAAGGAAAAATAATAGTTTCTATGATATTGATCGCCCACTAAATCTAGTAGGACATGCATGGGAGGTATGGAATGATGGTGATTCTCTAGAGTTAATGGATCCATTATTAAGTGACTCATTTGTTGGTGATGAAGTGAAAAGGTGCATTCATGTTGGTCTGTTATGTGTCGAACAAAATGCAAATGATAGACCTACAATGTCTGATGTTATATCGATGTTAACAAACAAATATGAACTTGTTACCTTACCAAGAAAACCAGCGTTTTATGTTAGAAGAGACATCTTTGAGGGGGAAACAACTTCAAAAGTGACGGGGACCGACACCTATTCCACGACTGCTATCTCTACCCTATCTGAAGTGGAGGAAAAAATATAA 2382 0.3564 MNSYKIEKQVVFMIIYLLWLCWSKHTNAKVDHLKPGDTLDMSSPLYSKQGKYYLSFSYVFGSNEHTYLSIFSSVNVQNNLVWLYDRNHPIYPDSQLLSLSHSGVLKIESKFGKPIIIYSSPQPINNTVATMLDTGNFVLEQFHPNGTKTLLWQTFDYPISTLIPNMKLGINRKTGHNWSLVSPITSSIWASGEFSLEWEPIEGELNIKKRDKVYWKSGKLRSNGLFENIPTSVQQMYRYVIVSNMDEDSFAFETTDRNYIRFPEWVLFATGRLINNVGDIGNADMCYGYNRDGGCQNWEDIPTCREAGHVFEKKNAIVSLDNATFEVNALYGYNDCKESCWRNCNCTAFTKYYNNGTGCVFYSWNFTKALDFGDEINLHALVQPTKIAHHGKKKWIWISAITAAILFIICPFILCLGIKRKKYEFKKKKTKMQDLVASNESYGIKDLEDDVKGHDINIFNYASILEATMDFSSENKLGQGGYGPVYKGILPTGQEVAVKRLSKNSGQGIVEFKNELVLICELQHTNLVQLLGCCMHEEERILIYEYMLNKSLDFYLFDSTKRMLLDWKKRFNIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTQQESTVNTNRIVGTYGYMSPEYAMEGICSTKSDVYSFGVLLLEIVCGRKNNSFYDIDRPLNLVGHAWEVWNDGDSLELMDPLLSDSFVGDEVKRCIHVGLLCVEQNANDRPTMSDVISMLTNKYELVTLPRKPAFYVRRDIFEGETTSKVTGTDTYSTTAISTLSEVEEKI* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2797 793 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
Psa4g2797 793 Pfam D-mannose binding lectin 80 182 IPR001480 -
Psa4g2797 793 Gene3D - 24 155 IPR036426 -
Psa4g2797 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672|GO:0006468
Psa4g2797 793 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 779 - -
Psa4g2797 793 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 181 IPR036426 -
Psa4g2797 793 Pfam Protein tyrosine and serine/threonine kinase 474 741 IPR001245 GO:0004672|GO:0006468
Psa4g2797 793 SUPERFAMILY Protein kinase-like (PK-like) 457 762 IPR011009 -
Psa4g2797 793 ProSiteProfiles Protein kinase domain profile. 471 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2797 793 SMART serkin_6 471 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2797 793 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 15 779 - -
Psa4g2797 793 Pfam PAN-like domain 306 364 IPR003609 -
Psa4g2797 793 CDD STKc_IRAK 477 744 - -
Psa4g2797 793 SMART blect_4 36 158 IPR001480 -
Psa4g2797 793 Coils Coil 786 793 - -
Psa4g2797 793 ProSiteProfiles PAN/Apple domain profile. 304 377 IPR003609 -
Psa4g2797 793 PIRSF SRK 2 267 IPR024171 GO:0004674
Psa4g2797 793 PIRSF SRK 281 791 IPR024171 GO:0004674
Psa4g2797 793 Gene3D Phosphorylase Kinase; domain 1 431 546 - -
Psa4g2797 793 Gene3D Transferase(Phosphotransferase) domain 1 547 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2797 Psa-Chr4 224046180 224049366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2797 418 760 Receptor kinase-like Gene Family AT4G11480 54.360 1.57e-123 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa4g2797 PK_Tyr_Ser-Thr 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2797 - - vun:114168194 908.672