Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2796 ATGGATGCTACTCAAACAGAAAAAATATATGTTGCAGTTGGCTATGATGTTCTAGATGGATTTCAAACATTGGATTGGGCTCTCAAAAAATGGAATTCTCATCCAAATATTTCTATCATCATTTTACATGTCAAATACAACCCTTCCAATCATCATGTTTATACACTCCTTGGAAAACTCCCTGCAAAAGGTGCATGCGAAGAGAAACTAGAACGTATAAGGAACTATCAACAAAACATTATCAACAATTTGCTTTCCAAGTATATAGCTTTATGTGACAAAGTTCCAGCTGAAACATTTGAGGTTGAGAAATTTGATGAACCAATGCAAAATCTCACTATAGATTTGATCCATGGTCTTGGAATAACCAAATTGGTTATTGGATTTTCATTCATGAGACCTTCCATGAAATCGAAAGATGCCATGAACGGATTGTTCTACGTTCATCAGCACAAGCCTGATTTCTGTGAATTGTTCATCATCTGTGGAGGGAAGCAAGTTTCACCGAGAGTGAAAAATGATGAGATAACCATGGAGGATGATAGCGGTGTCAAGGTTGCAAAAATGCGAGATTATAAGACGAATTTTAGATATTGGATAGAGAGAATTTTCTGTGATAAAACTATTGATTCCAACCAAGGGTGTTCTAGCAGATCATCGACAAGTTCGGAGTCTCATATTGATCAAAATGAGTGGGAGCTTTATATCCGAGAAATCGATAGTTATTTTCAAGAGTTACTGTCTTTAAATATGGAGGAAGGAATTTGTGGACAAGACAATGATGATTCTTACTTTAGTCCAATTGAGCCATTTGTCCAACAACTTAAAAATTCTGATAATAAGAGTGGTGCAGAGAAATTTAAGATCCTCAGAGATAAACTGAAAGAAGCTTATGATACAATCCAAGTGAAAAGAAAAGAAGAAAAGGAGAATTTGGAGAGGCATGCAAAAGCTGAATGGGCTATTTATGTATCCAATCTTCGGGAAGAAGAACTTGAATATCTAAAAAGTGAAGAAGTGACACGAAAGGAAGAGGTAAAGAAGGAAGTAAATACAGAAAAAGAACAAATTCAAAAAATTAGAATGAATATTGAAGATAACGAGCAAAGTCTTGGATCAATGGAAGAGCTACAACTAGAGCTCCAAAGTAAACTTCATGATTCCACACTGGAAGTTTCAGAATGCGAAACCAAATTTGAGAATGTAATGGCTGAAAGGACAAAGATGTTAATGGAGATAGAGGAGCTAAGTAGACAAAGAAACGTGTTGAACAAAAGGATTATGTTTTTCAAAGAAAAAGTTGAAAAAGAAATATGCAATAAGCTAATAACGAAGAGTTGTTGTTTAGAAGAGTACACAGAGGAAGAAATCATCATGGCTACCAACAATTTTTCAGAATACTTAAGGTTGAAATCTGGTAGAAATTGGAGTAATGTTTATAGAGGAAACATTAATAACTCCAATGTTGCAATCAAGATGATTGATCCTACTCTTGCCTTGTCCCGAAAAGATTTCCAAGATAAGTTGATGTTTCTTGGTAATATTCGGCATCCTCATCTGGTTGCTGTATTGGGCTTCTGTTCGGACCCGAAATGCTTAGTTTTCGAATACATGCACAATGGTACCTTGGAAGAAGCCCTACTTTGCAAGACAAGAAGAAGGGTCATAAGCTATCAAGATTGCATAAGGATAGCCATAGAAGTTTGTTCTGGTCTGGGCTTTCTCAATACATTTCAGCCCAGATCCATCATTCATTGTCGCATTTCTCCATCCAACATCCTCCTAAATAAAAATCTTGTTGCAAAGGTGGCGGGGTTTGACCTTCATGGCTGCAATGAAGAATGTAACGTTGAGTCGGACATGAAGGCAATAGGGGTTTTGTTGTTGCATCTATTGACCGGAAGAGGAAATTGGGTGACAATTGATATGATAGCTTTTTTTGATGAGATTGGTGATGAATGGCCATTGGATGTTGCAAGAGAACTTCTGGACTTAGCAATAAGGTGCATTTCCAATGAAGAAATGAGCATAACAAGAGTTATGAAAGAACTCAATTCGATCAAAGGAAAGGGTTGTGACTCCATTAAAGTTCCTAACATTTTCCTTTGTCCAATCCTTCAGAAGGTAATGAGAAATCCACACATAGCAGCAGATGGATATTCTTATGAGCTAGAAGCAATAGAAGAGTGGTTGGATTCGGGAAATGAAATATCACCTAAAAGCTTGAGGCTCGACAATACATTACTTTTCCCGAATCATAACCTCCGTTCCCTAATACAGTACTGGCATAGTAACAGATCAGCTACAAAAAAATGA 2316 0.367 MDATQTEKIYVAVGYDVLDGFQTLDWALKKWNSHPNISIIILHVKYNPSNHHVYTLLGKLPAKGACEEKLERIRNYQQNIINNLLSKYIALCDKVPAETFEVEKFDEPMQNLTIDLIHGLGITKLVIGFSFMRPSMKSKDAMNGLFYVHQHKPDFCELFIICGGKQVSPRVKNDEITMEDDSGVKVAKMRDYKTNFRYWIERIFCDKTIDSNQGCSSRSSTSSESHIDQNEWELYIREIDSYFQELLSLNMEEGICGQDNDDSYFSPIEPFVQQLKNSDNKSGAEKFKILRDKLKEAYDTIQVKRKEEKENLERHAKAEWAIYVSNLREEELEYLKSEEVTRKEEVKKEVNTEKEQIQKIRMNIEDNEQSLGSMEELQLELQSKLHDSTLEVSECETKFENVMAERTKMLMEIEELSRQRNVLNKRIMFFKEKVEKEICNKLITKSCCLEEYTEEEIIMATNNFSEYLRLKSGRNWSNVYRGNINNSNVAIKMIDPTLALSRKDFQDKLMFLGNIRHPHLVAVLGFCSDPKCLVFEYMHNGTLEEALLCKTRRRVISYQDCIRIAIEVCSGLGFLNTFQPRSIIHCRISPSNILLNKNLVAKVAGFDLHGCNEECNVESDMKAIGVLLLHLLTGRGNWVTIDMIAFFDEIGDEWPLDVARELLDLAIRCISNEEMSITRVMKELNSIKGKGCDSIKVPNIFLCPILQKVMRNPHIAADGYSYELEAIEEWLDSGNEISPKSLRLDNTLLFPNHNLRSLIQYWHSNRSATKK* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2796 771 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 695 771 IPR013083 -
Psa4g2796 771 SUPERFAMILY Protein kinase-like (PK-like) 449 671 IPR011009 -
Psa4g2796 771 Gene3D Phosphorylase Kinase; domain 1 448 537 - -
Psa4g2796 771 Coils Coil 291 311 - -
Psa4g2796 771 PANTHER OS02G0152300 PROTEIN 4 764 - -
Psa4g2796 771 CDD RING-Ubox_WDSUB1_like 701 739 - -
Psa4g2796 771 Pfam Protein tyrosine and serine/threonine kinase 476 609 IPR001245 GO:0004672|GO:0006468
Psa4g2796 771 Gene3D Transferase(Phosphotransferase) domain 1 544 684 - -
Psa4g2796 771 Coils Coil 399 433 - -
Psa4g2796 771 PANTHER U-BOX KINASE FAMILY PROTEIN 4 764 - -
Psa4g2796 771 Coils Coil 343 370 - -
Psa4g2796 771 Pfam U-box domain 697 766 IPR003613 GO:0004842|GO:0016567
Psa4g2796 771 ProSiteProfiles U-box domain profile. 696 769 IPR003613 GO:0004842|GO:0016567
Psa4g2796 771 ProSiteProfiles Protein kinase domain profile. 453 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2796 771 SUPERFAMILY RING/U-box 693 766 - -
Psa4g2796 771 SMART Ubox_2 700 762 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2796 Psa-Chr4 224040473 224043819 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2796 3 768 U-box Gene Family AT5G65500 41.697 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Psa4g2796 PK_Tyr_Ser-Thr 1.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2796 - - gmx:100795815 941.414