Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2793 ATGTTATTTGATTCCTCAGGTTCAGAGATGTCAAACCTTTCCAACGTGATAGATTTGAATGAGAACGAAGAGAGAAAACCAGAAGCAGAAGAAGAGTTAGAAGATGAAGAAAGTTTCTCATATGCTATACAACTTAGCACCTCTATTGTTCTTCCAATGGCACTTCAATCTGCAACCGAGCTTGGTGTCTTTGATGTGTTGCTAAAAGCTGGTAACGATGCTCAACTCTCTGCCGACGAGATTGCGTCTCGTCTCTCATGTACCAATCCAGATGCTCCCAAAATGTTGGATCGGATCCTTGCTCTTCTTGCATCTCATTCTATATTGAAGTGTTTGGTTCTTCAAGATGAACAAAAGCTTGGATTGTTTCGTAGACTTTATACTATGGCTCCTGTTGCTAGATTCTTCGCTCGTGATTCTGGTGGTGTTTCCTTGGGACCCTTACTGGCTTTGATTCAAGATAAAGTCTTCTTAGCTAGTTGGCCGGAGCTTAAGAATGCAATTCGAGAAGGGGGTGTTCCATTCGACAGAGTTCATGGCACACATGCCTTTGAATATCCGGGTTTGGACTCGAGGTTCAACCACGTTTTCAATACAGGTATGATCAATCATACCAAAGTAGTTATGAAGAAGATTCTCGAATGCTACAAAGGTTTTGATAATGTAAAAAAGCTTGTGGATGTTGGAGGTGGTCTTGGTGTCAACATTAACTTAGTCACCTCCAAATATCCTCGTATTAAGGGTATCAATTTCGACTTGCCTCATGTCATACAACACGCTCCTTCTTATCCTGGAGTTGAACATATTGGTGGAGATATGTTTGAAAGTGTGCCTAAAGGAGATGCCATTTTTATGAAGTGGATACTTCATGATTGGAGCGATGAGCATTGCTTGAAGCTTTTGAAGAATTGTTATGATGCTATTTCTGATGATGGAAAGGTGATTGTTTTGGAGGCACTTCTTCCTATTATACCTGAAAATGGATATGCTTCGAAGTCTACCTCTCAATTGGATGTTCTGATGATGACTCAAAATCCAGGTGGAAAAGAACGAACTAGGCAAGAATTTGAAGATTTGGCAACAAGAGTTGGATTTAGTGGCATCAGATATGAATGTTGTGTTCGTAACTTTTGGGTTATGGAATTCTTTAAGTGA 1155 0.4017 MLFDSSGSEMSNLSNVIDLNENEERKPEAEEELEDEESFSYAIQLSTSIVLPMALQSATELGVFDVLLKAGNDAQLSADEIASRLSCTNPDAPKMLDRILALLASHSILKCLVLQDEQKLGLFRRLYTMAPVARFFARDSGGVSLGPLLALIQDKVFLASWPELKNAIREGGVPFDRVHGTHAFEYPGLDSRFNHVFNTGMINHTKVVMKKILECYKGFDNVKKLVDVGGGLGVNINLVTSKYPRIKGINFDLPHVIQHAPSYPGVEHIGGDMFESVPKGDAIFMKWILHDWSDEHCLKLLKNCYDAISDDGKVIVLEALLPIIPENGYASKSTSQLDVLMMTQNPGGKERTRQEFEDLATRVGFSGIRYECCVRNFWVMEFFK* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2793 384 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 43 384 IPR016461 GO:0008168
Psa4g2793 384 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 26 384 - -
Psa4g2793 384 Pfam Dimerisation domain 53 104 IPR012967 GO:0046983
Psa4g2793 384 MobiDBLite consensus disorder prediction 1 33 - -
Psa4g2793 384 Gene3D - 18 136 IPR036388 -
Psa4g2793 384 MobiDBLite consensus disorder prediction 1 18 - -
Psa4g2793 384 SUPERFAMILY "Winged helix" DNA-binding domain 34 139 IPR036390 -
Psa4g2793 384 PIRSF O-mtase 18 384 IPR016461 GO:0008168
Psa4g2793 384 Coils Coil 19 39 - -
Psa4g2793 384 Gene3D Vaccinia Virus protein VP39 137 384 IPR029063 -
Psa4g2793 384 PANTHER O-METHYLTRANSFERASE 26 384 IPR016461 GO:0008168
Psa4g2793 384 Pfam O-methyltransferase domain 161 366 IPR001077 GO:0008171
Psa4g2793 384 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 142 382 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2793 Psa-Chr4 223994673 223997008 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2793 32 384 Monolignol Biosynthesis Gene Families AT5G54160 51.831 3.78e-137 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2793 K13066 - gmx:100803633 544.658