Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2780 ATGGAGACAGATAACAAAACTCAAAGACAAGCCGTCTCCTACCACTCTTCTCTCCGTTCAGGTGCCACTTTGCTCTCACGCCGACTGTTCCCTTCTTGCCGCACATTCATCCTCCGCCAACCAAGATCTGATCCCGATATTGCGACTCAACTTGACCGCATGCTCACAATAATAGATGTTTTAGAGGCTGCATCACTCCGAGTCGGTCCCGGCAACAACCTTCCCGATCACTATGCCGTCCTCCAACTCAAACCCTCCGACACCAACACCAGAAACCGTGATTTTGTGCGGCAGCGTTTCAAGAAGCTTGTTCGCCAGCTTGACCCAAACAAAAACAAGTTTCCTTTAACGGAAGAAGCTCTGATGCGAGTCCGTGAAGCCTGGCAAATTCTCTCTGACCCGGTTCAATTAGCCCGGTACGAACATGAGATTAGAGGAGAGGCTGAGGTTGAGGTTGTTTCGCCAGCTTCGTTTTGGACTATGTGTCCTTATTGCTGGTACTTGCATGAGTATGAGAAGAAATACCAAGATTGTACCCTTCGGTGTGGTAACTGTCAGAGGACATTTCACGGAGCTCCGGTGAAGCCGCCGGAGCCGGAGTCGATGGTGGAGGGGAAAGAACAGTACTATTGCTATCACATGAGTTTGCCCTTAAGGTATCCTGTGGATGAAAATTGTAGTTTTGAATTTGGGGGTAATGCGGGTAGGAAGATGAGGATAAAAACTGTGGCTAATAGGTCTAGAGTGAAAGGGTTTGTTGTTCCCGATAGTGAATCTGAATCGGATCCTGAAATGGAAGTGGAGCTGTGA 810 0.4852 METDNKTQRQAVSYHSSLRSGATLLSRRLFPSCRTFILRQPRSDPDIATQLDRMLTIIDVLEAASLRVGPGNNLPDHYAVLQLKPSDTNTRNRDFVRQRFKKLVRQLDPNKNKFPLTEEALMRVREAWQILSDPVQLARYEHEIRGEAEVEVVSPASFWTMCPYCWYLHEYEKKYQDCTLRCGNCQRTFHGAPVKPPEPESMVEGKEQYYCYHMSLPLRYPVDENCSFEFGGNAGRKMRIKTVANRSRVKGFVVPDSESESDPEMEVEL* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2780 269 SUPERFAMILY Chaperone J-domain 71 143 IPR036869 -
Psa4g2780 269 ProSiteProfiles dnaJ domain profile. 76 146 IPR001623 -
Psa4g2780 269 Pfam DnaJ domain 76 140 IPR001623 -
Psa4g2780 269 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 8 263 - -
Psa4g2780 269 Gene3D DnaJ domain 72 154 IPR036869 -
Psa4g2780 269 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 8 263 - -
Psa4g2780 269 SMART dnaj_3 75 136 IPR001623 -
Psa4g2780 269 CDD DnaJ 76 133 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2780 Psa-Chr4 223667960 223669726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2780 24 220 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.108 1.61e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2780 - - gmx:102659715 278.485