Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2777 ATGCGAGGTGTACTCGGATCTGTTCTCAATAGCACTGATGATTTGTCAGCACCCTCATCTTTCGCTAATGGCTTTTTAGGCAACGACAAACCAAAATCTCGACATGTTTCAAAAAGGGAAGAACGTCAACAACAATCAGTGGTTGGCACTCCAGATTATTTGGCACCCGAAATACTTCTGGGCATGGGACATGGTACAACTGCAGATTGGTGGTCGGTGGGTGTCATACTTTATGAGCTTCTCGTGGGTGTTCCACCTTTTAATGCAGAACATCCACAGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCAAAGTATCCTGAGGAGATCAGCTATGAGGCATATGCTTNTCAAAAATCAAATGATAAGTTAACGGACTTTGGACTCTCAAAAGTTGGTCTCATCAACAGCACTGATGATTTGTCAGCACCCTCATCTTTCGCTAATGGCTTTTTAGGCAACGACAAACCAAAATCTCGACATGTTTCAAAAAGGGAAGAACGTCAACAACAATCAGTGGTTGGCACTCCAGATTATTTGGCACCCGAAATACTTCTGGGCATGGGACATGGTACAACTGCAGATTGGTGGTCGGTGGGTGTCATACTTTATGAGCTTCTCGTGGGTGTTCCACCTTTTAATGCAGAACATCCACAGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCAAAGTATCCTGAGGAGATCAGCTATGAGGCATATGCTTTGATGAATAAATTATTAATAGAAAACCCAGTACAAAGGTTAGGTACAACAGGAGCTTAA 804 0.4154 MRGVLGSVLNSTDDLSAPSSFANGFLGNDKPKSRHVSKREERQQQSVVGTPDYLAPEILLGMGHGTTADWWSVGVILYELLVGVPPFNAEHPQQIFDNIINRDIQWPKYPEEISYEAYAXQKSNDKLTDFGLSKVGLINSTDDLSAPSSFANGFLGNDKPKSRHVSKREERQQQSVVGTPDYLAPEILLGMGHGTTADWWSVGVILYELLVGVPPFNAEHPQQIFDNIINRDIQWPKYPEEISYEAYALMNKLLIENPVQRLGTTGA* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2777 267 SUPERFAMILY Protein kinase-like (PK-like) 42 118 IPR011009 -
Psa4g2777 267 Pfam Protein kinase domain 39 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2777 267 Pfam Protein kinase domain 123 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2777 267 Gene3D Transferase(Phosphotransferase) domain 1 40 117 - -
Psa4g2777 267 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 126 267 - -
Psa4g2777 267 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 8 118 - -
Psa4g2777 267 ProSiteProfiles Protein kinase domain profile. 1 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2777 267 PANTHER SERINE/THREONINE-PROTEIN KINASE 126 267 - -
Psa4g2777 267 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 118 - -
Psa4g2777 267 SUPERFAMILY Protein kinase-like (PK-like) 124 263 IPR011009 -
Psa4g2777 267 SMART serkin_6 20 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2777 267 MobiDBLite consensus disorder prediction 28 47 - -
Psa4g2777 267 Gene3D Transferase(Phosphotransferase) domain 1 122 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2777 Psa-Chr4 223576114 223580508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2777 98 267 AGC Kinase Gene Family AT5G62310 66.667 3.09e-69 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Psa4g2777 Pkinase 1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2777 - - gmx:100806311 265.774