Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2729 ATGGAGAGATTAGAGAGAAGGAGCAAGAAGGATCAAGAAAAGAAAGAGAAGAGAACAAGAAACTTTGTCGAATTAATAACCGGTAACAATAACATCCACAACGGCTTTAAGAAAGAGAGTGTTGTTATTACAAATGACAATAGTAACTACAATGATATATCAATAGGGTCACCAGTACCTTCACCAAGATGTGTATTTGAGGTACCCATATCGGATTCAGACAGCACGGGAAGCGAAAACTACAACAGTTCGCAACGGACGCAACAGGGAGGAAAGTTATCACCAAGTGGAGGAGGAGATGGACATCAATGGAGGAATATGATTGATGCATTGAGGTTTAAGTCTGTGAGGAGATTTTCTACCATTCCTTTGCTTGCTGCTAGCTATGAAATTTCTAGGAGAAGTTTGAGGAATAAATTGGCTCGTGCAAGAGGTAATGACGATGAAAATGATTTTGATGGTTCTATCGATCTTGAAGGAATTACCAAGCCTTCTTGGAGAAATTTTAGTTTTGAAGATCTTGCTGCTGCAACCGATAATTTCAATCCCGAGAACATGATTGGAAAAGGTGGTCATGCAGAAGTGTACAAAGCAAGGTTACCTGATGGACAAGTTGTAGCAGTAAAGAGACTAATGAGGAATGAAAAAGAAGCTGGAGATAAAGCTGGTGATTTCTTATCAGAGCTTGGGATTATTGCTCACATTAACCATCCAAATGCAACAAAACTCATTGGTTTCGGAATCGATCGCGGACTCTACTTTGTTCTACAGTTTGCTTCACATGGAAGCCTTTCTTCTATGCTCTTTGGTTCTGAAGGTTTGGAATGGAATAGAAGGTTCAAGGTAGCAGTTGGTGTGGCCAAAGGTTTGCAGTATCTTCATCAAGATTGTCCGAGAAGAATCATTCATAGAGATATCAAAGCCTCAAACATATTACTCAACCATAATGATGAAGCTGAGATTTCAGACTTTGGATTGGCGAAATGGCTTCCAGATAAATGGGCTCACCATGTTGTTTTTCCAATAGAAGGCACATTCGGGTATTTAGCTCCAGAATATTTCATGCATGGACTTGTGGATGAGAAGACTGATGTTTTTGCATTTGGGGTATTGTTACTCGAGCTCCTGACGGGTCGCCGTGCAGTTGATTCCAATAGCAGGCAAAGTCTTGTAATCTGGGCTAAACCATTATTGGATGCAAAGCAAGTGAAAGAAATAGCAGATCCAAGATTAGAAGACCAATATGATCCAGTTGAAATGGAGATTGCCATGGCAACAGCTTCCATGTGTATCCACCACATGTCCTCTAAAAGGCCATACATGAGTCAGGTTGTGCTACTACTGAAGGGAGAAGAGGTGGCTATGGACTTCACTCAAAAATCAATAGCATCAAGGTCACTCTTGTTAGATGCTTGTGATTTAGAAGACTATACTTGTTCAAATTACTTGAATGATATCAATCGGCACAAGCAATTAATCATGGAGTGA 1488 0.4026 MERLERRSKKDQEKKEKRTRNFVELITGNNNIHNGFKKESVVITNDNSNYNDISIGSPVPSPRCVFEVPISDSDSTGSENYNSSQRTQQGGKLSPSGGGDGHQWRNMIDALRFKSVRRFSTIPLLAASYEISRRSLRNKLARARGNDDENDFDGSIDLEGITKPSWRNFSFEDLAAATDNFNPENMIGKGGHAEVYKARLPDGQVVAVKRLMRNEKEAGDKAGDFLSELGIIAHINHPNATKLIGFGIDRGLYFVLQFASHGSLSSMLFGSEGLEWNRRFKVAVGVAKGLQYLHQDCPRRIIHRDIKASNILLNHNDEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGLVDEKTDVFAFGVLLLELLTGRRAVDSNSRQSLVIWAKPLLDAKQVKEIADPRLEDQYDPVEMEIAMATASMCIHHMSSKRPYMSQVVLLLKGEEVAMDFTQKSIASRSLLLDACDLEDYTCSNYLNDINRHKQLIME* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2729 495 ProSitePatterns Protein kinases ATP-binding region signature. 187 209 IPR017441 GO:0005524
Psa4g2729 495 PANTHER OS08G0249100 PROTEIN 1 495 - -
Psa4g2729 495 Gene3D Phosphorylase Kinase; domain 1 155 256 - -
Psa4g2729 495 SUPERFAMILY Protein kinase-like (PK-like) 165 451 IPR011009 -
Psa4g2729 495 Coils Coil 1 21 - -
Psa4g2729 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Psa4g2729 495 MobiDBLite consensus disorder prediction 1 21 - -
Psa4g2729 495 MobiDBLite consensus disorder prediction 73 94 - -
Psa4g2729 495 MobiDBLite consensus disorder prediction 73 99 - -
Psa4g2729 495 ProSiteProfiles Protein kinase domain profile. 181 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2729 495 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 1 495 - -
Psa4g2729 495 Pfam Protein kinase domain 184 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2729 495 Gene3D Transferase(Phosphotransferase) domain 1 260 465 - -
Psa4g2729 495 SMART serkin_6 181 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2729 Psa-Chr4 216519742 216523417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2729 169 444 Trihelix Transcription Factor Family AT1G68690 44.406 2.33e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Psa4g2729 Pkinase 1.7e-39 CL0016