Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2723 ATGACAACCAGCCTTAAGAAAAACCGCAAGAAGCGCGGCCACGTCAGCGCCGGCCACGGCCGTATCGGTAAACACCGAAAACATCCTGGCGGACGAGGAAATGCCGGAGGTATGCACCACCACCGCATCCTATTTGACAAGTATCATCCCGGTTACTTCGGTAAGGTAGGTATGCGATACTTCCACAAACTCCGCAACAAATTCCACTGTCCCACCGTGAACATTGATACTCTTTGGTCTCTTCTACCTCAAGAGGTGAAAGACAAAGCGGCGAAGTCGAAGGATACTGCGCCGGTTATCGATGTTTCGCAGTTTGGGTACTTCAAGGTTCTTGGTAAAGGGGTTTTGCCGTTGAATCAGCCTGTTGTTGTTAAGGCGAAGCTGATTTCGAAGACTGCGGAGAAGAAGATTAAAGAAGCAGGTGGTGCTGTTCTTCTTACTGCTTAA 447 0.4944 MTTSLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFHCPTVNIDTLWSLLPQEVKDKAAKSKDTAPVIDVSQFGYFKVLGKGVLPLNQPVVVKAKLISKTAEKKIKEAGGAVLLTA* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2723 148 Gene3D - 58 148 - -
Psa4g2723 148 ProSitePatterns Ribosomal protein L15 signature. 109 141 IPR001196 GO:0003735|GO:0005840|GO:0006412
Psa4g2723 148 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 148 - -
Psa4g2723 148 Hamap 50S ribosomal protein L15 [rplO]. 1 147 IPR030878 GO:0003735|GO:0006412|GO:0015934
Psa4g2723 148 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 IPR021131 -
Psa4g2723 148 SUPERFAMILY Ribosomal proteins L15p and L18e 6 147 IPR036227 -
Psa4g2723 148 MobiDBLite consensus disorder prediction 1 34 - -
Psa4g2723 148 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2723 Psa-Chr4 216244353 216246681 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2723 1 148 Cytoplasmic Ribosomal Protein Gene Family AT1G23290 83.784 3.35e-88 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2723 K02900 - sly:101268580 284.263