Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2713 ATGGAAGAGAGCAATGATTTATCAAACCTTATGTGCTTTGAAAACATCTCAACATGCTTTGAAAATCTTGAAAGTGATGTTGTTGATGATGGCTCTACTCTTCTTTCGTGGAACCAAAACAAAAACTTTAACTCTGACAATCCTTGTCTGAGTTATAACAACATTGAATCAATGAACTTGTTGGGATTTTTCATTCTTAGTGATGAAATTATTTTGTGTTTGGTTAAGAAAGAGCCTGAACATTTGCCTCGTGAAGATTATCTTGAGAGGCTTCGTGGTGGAGACATGAACTTTAATTTGATTGATATTAGGAATGAAGCTATTGAATGGATTTGGAGGGCTAGTGCATGTTATGGTTTTGGACCCATTACCCTTTCTCAAGCTGTGAATTACCTGGATCGTTTCCTATCTGTATACAATTTTGAAAGAGGCCGTGATTGGAGTCTCCAATTGCTGGCTTTAGCATGTGTATCAATTGCTGCTAAAATTGAGGATAGTGAAATATCACCAAAATCTGAAAATATTGAGTTTGGAGAATCAATGTTTGTATTTGAAACTAAAGGCATTCACACAATGGAGCTATTGGTATTAAACCATTTGAATTGGAAAATGCAATCTTCAACTCCATGTACCTTTGTTGATCACTTCCTTAGAAAGATTACTTGTGAGCAGCAGACTCCTTCAGGGTCATCAATTTTGAGTTCATTAGATCTCATTCTTGATATAACTAAACATATTGATTTCTTGGAATTTAGGCCTTCTGAAGTTGGTGCAGCAATTGCAATATTTGTTTCAAAGGAATTGGAAACAAGTGAGATCGATGACGTCTTGACTCGTTTTGCTGTCGTTGAGAAGGATAAAGTTTTGAAGTGTATTGAAGTGATGCAAAGTTTGACATGGATGGAATTTTCTGCTGATTTAAGCAGGAGCCGGATGGAAACATTTGCTGCTGAAAGCCCTAATGGAGTGCTGGATTGTGCAATGTGCTTGAGCTCTAAAAGTGATGAAACAACAAGAGATGAATTAGAAGCAATTTCTTCTCCTGAAAGTTCAATTACTAGCAAGAGGCATAAGTCCTTCCATGATGGTGGAACTTCTTCTAATCATGAACTTTGA 1116 0.3656 MEESNDLSNLMCFENISTCFENLESDVVDDGSTLLSWNQNKNFNSDNPCLSYNNIESMNLLGFFILSDEIILCLVKKEPEHLPREDYLERLRGGDMNFNLIDIRNEAIEWIWRASACYGFGPITLSQAVNYLDRFLSVYNFERGRDWSLQLLALACVSIAAKIEDSEISPKSENIEFGESMFVFETKGIHTMELLVLNHLNWKMQSSTPCTFVDHFLRKITCEQQTPSGSSILSSLDLILDITKHIDFLEFRPSEVGAAIAIFVSKELETSEIDDVLTRFAVVEKDKVLKCIEVMQSLTWMEFSADLSRSRMETFAAESPNGVLDCAMCLSSKSDETTRDELEAISSPESSITSKRHKSFHDGGTSSNHEL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2713 371 Gene3D - 84 205 - -
Psa4g2713 371 SMART cyclin_7 109 198 IPR013763 -
Psa4g2713 371 Pfam Cyclin, C-terminal domain 208 299 IPR004367 -
Psa4g2713 371 MobiDBLite consensus disorder prediction 338 371 - -
Psa4g2713 371 SUPERFAMILY Cyclin-like 62 204 IPR036915 -
Psa4g2713 371 PANTHER CYCLIN-D4-1-LIKE 54 359 - -
Psa4g2713 371 CDD CYCLIN 104 197 IPR013763 -
Psa4g2713 371 Pfam Cyclin, N-terminal domain 70 204 IPR006671 -
Psa4g2713 371 ProSitePatterns Cyclins signature. 104 135 IPR006671 -
Psa4g2713 371 Gene3D - 74 293 - -
Psa4g2713 371 SMART Cyclin_C_2 207 332 IPR004367 -
Psa4g2713 371 MobiDBLite consensus disorder prediction 354 371 - -
Psa4g2713 371 PANTHER CYCLINS 54 359 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2713 Psa-Chr4 215414196 215416374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2713 67 275 Core Cell Cycle Gene Families AT5G65420 49.761 3.40e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2713 K18810 - tcc:18611480 299.286