Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2692 ATGGAACAACCACTTCAACGCTTCAACGGAATGTCTCCGACGGAACAACCAGACAACCACCGCCGCCACAAAAAGACTCCACCCTCCGCCGCAGCAACAACCAAAACCGGAAGCACGATACGATACCGCGGTGTCCGACGCCGACCATGGGGCCGTTACGCAGCCGAAATAAGAGACCCACACTCCAAAGAACGCCGCTGGCTTGGTACCTTCGATACAGCGGAACAAGCCGCGTGCGCCTACGACTGCGCCGCCATTTCCATGCGCGGTTCTAAAGCTAGAACCAATTTCTTTAACCCCGAAACCGAAACCACCGAACAACAACATCATTATCAACATCATCATCAACAGCAACAACAGCAACAGCAACATTGTCTTTTTCATTCTTTCAATATTCCTAAACAGCAACATTCTCAACACCGCCAAGTCAACAAATTCAACGGTGGTGATTATCTCAACACTTCTTCTTTTGTTCCTTCTCTTGTTCAACACTTTCCAAACAAAACCAGTGACACTATTTCTTCTTCTTCAGCTTCATCTTCTATTGTTGATGTTAATGTTACTGAGGACATTATCGACGATGACTCGGATTTTTTTCCGAGAGAATCTTCTGGCTTGTTGGAAGAGATTGTTCACAAGTTTATGAAAAGTTCGAAAACAACAAATAACGATAAGAAGATGAAAACCGAAACTTTTGCCTCAGTTTCTCAACCAATAATGTCTCATCATCATAACATGCTTTCTGAGAACGAGGGTTTTGGTTCTGTTTCTTTTGATCAACAGCAAGGTTTTCCAATGCAACAGTTTGAGAGTTTTGATAATGGTTTTAACTTTAACAACAACGTGGCTATGTGTGTTGGGGAAAATCATCATGTAGAAGAGTATTCTATCATGGAAGATTCTTTTTACTATCCTGAACTTTTTCATTCTTTTGCTACTAGGATGCAAAATGCTTAA 957 0.4232 MEQPLQRFNGMSPTEQPDNHRRHKKTPPSAAATTKTGSTIRYRGVRRRPWGRYAAEIRDPHSKERRWLGTFDTAEQAACAYDCAAISMRGSKARTNFFNPETETTEQQHHYQHHHQQQQQQQQHCLFHSFNIPKQQHSQHRQVNKFNGGDYLNTSSFVPSLVQHFPNKTSDTISSSSASSSIVDVNVTEDIIDDDSDFFPRESSGLLEEIVHKFMKSSKTTNNDKKMKTETFASVSQPIMSHHHNMLSENEGFGSVSFDQQQGFPMQQFESFDNGFNFNNNVAMCVGENHHVEEYSIMEDSFYYPELFHSFATRMQNA* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2692 318 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Psa4g2692 318 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Psa4g2692 318 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 34 159 - -
Psa4g2692 318 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 168 318 - -
Psa4g2692 318 SUPERFAMILY DNA-binding domain 41 97 IPR016177 GO:0003677
Psa4g2692 318 MobiDBLite consensus disorder prediction 1 15 - -
Psa4g2692 318 MobiDBLite consensus disorder prediction 1 42 - -
Psa4g2692 318 CDD AP2 41 97 IPR001471 GO:0003700|GO:0006355
Psa4g2692 318 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Psa4g2692 318 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Psa4g2692 318 Pfam AP2 domain 41 90 IPR001471 GO:0003700|GO:0006355
Psa4g2692 318 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 168 318 - -
Psa4g2692 318 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 34 159 - -
Psa4g2692 318 Gene3D AP2/ERF domain 40 99 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2692 Psa-Chr4 213681913 213683480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2692 1 215 AP2-EREBP Transcription Factor Family AT1G24590 37.795 1.52e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Psa4g2692 AP2 8.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2692 - - mtr:MTR_8g069360 300.441