Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2680 ATGCTGAAAAGCTATATCAAACACTTAAGGACAATAAGCGATTCAGCAAACCGAAGTTGTCACGAACTGACTTCACCATCAATCACTATGCTGGTGATGTCACGTATCAAATTGATCTTTTCCTTGATAAAAACAAAGACTACGTTGTTCCGGAACACGCTGCGCTGTCTGTGCTTCCAAGTGCTCCTTTGTTTAGGACTTTTCCCACCTTTACACGAGGAAAGTACTAAATCAACAAAGTTTTCTTCTATAGCCACTCAGTTTAAGTATAATGGAACTAAGGTTCTAAAATCATGTCCTGATGAGATGACGGCTTGCAAGAGACTTCTAGATAAAGCAAACCTTAAAGATTATCAGATAGGAAAGACAAAAGTTTTCCTGAGAGCAGGTCAAATGGCAGAACTAGATGCATGTCGTGCCAAGGTCCTAGAAGATCCACAATCGTTATTCAGAAAAAGCTCGCACATATATTGTGAGAAACAGTACAAGTTATTGCGATTTTCTGCCATAGAACTACAAAGGGCTATTAAAGGACAACTTGCAAGACGTCGGTATGAATGCATGAGAAGGGAGGCCGCATCTTTGATAATCCAGAAACAAACCGCATTTGAATTGGGACTTTGCCCCAGGGATTCAAACGACTTTGTTTGGGTCGTTTGA 660 0.4045 MLKSYIKHLRTISDSANRSCHELTSPSITMLVMSRIKLIFSLIKTKTTLFRNTLRCLCFQVLLCLGLFPPLHEESTKSTKFSSIATQFKYNGTKVLKSCPDEMTACKRLLDKANLKDYQIGKTKVFLRAGQMAELDACRAKVLEDPQSLFRKSSHIYCEKQYKLLRFSAIELQRAIKGQLARRRYECMRREAASLIIQKQTAFELGLCPRDSNDFVWVV* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2680 219 ProSiteProfiles IQ motif profile. 165 194 IPR000048 GO:0005515
Psa4g2680 219 Gene3D - 77 175 - -
Psa4g2680 219 PANTHER MYOSIN HEAVY CHAIN 64 90 - -
Psa4g2680 219 PANTHER MYOSIN HEAVY CHAIN 94 202 - -
Psa4g2680 219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 195 IPR027417 -
Psa4g2680 219 PANTHER MYOSIN 64 90 - -
Psa4g2680 219 PANTHER MYOSIN 94 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2680 Psa-Chr4 213046004 213048424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2680 81 200 Myosins gene family AT1G04600 49.587 1.22e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2680 K10357 - gmx:100788123 157.147