Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2670 ATGTCTTCTTCACCATATTTTTATTTTACTCTCCTCTTCTTTTGCTACTATTTTGCATCACCTACACTTTCTTCTGATCCAGGAGCAACAAAAGTTCTTTTACTATGCACAAACAAAACCGCAACCTCAATGTCATTCCGCAGAATCTTCATCTCAAACTTCCTCTCGGCAATGGACTCATTAACTCCTCTAATCTCAAAACAAGGATACGCCGCCGTTTCAAATGGAGCACAAAACGCCACCGTCTTCGCCTACGGGGAGTGCATAAAGGATCTCTCTCAATCAGATTGTAACATATGTATCGCACAGTGTAAAACACAGATCCTAAGCTGTTTGCCGTTTCAGAAAGGTACACGTGGAGGAAGATTGTTGTTTGACGGTTGTTATATACGGTACGATGAATACAGTTTCTTCAACGAGAGTTTTAGTATTCAAGATGCGACCGTGTGTGGAAGTAATGAAACTAGGAATAATGTTTATGAAGATAATGTTTTGGAGTTGGTGAGGAATTTGAGCGTGTTGGCGCCAAAAAATGATGGGTTTTCTGTTGGGTTTGTTGAGAGAAAGAATGTAACGGTTTATGGTTTGGCTCAGTGTTGGAAGTTTGTTACTGGTAGTAACTGTCGTAGATGTTTGGAAGATGCTGTTACTAGGATTGGTTCTTCGTGTCGGAAGAAAGAAGATGGAAGGGCTTTGAATTCTGGTTGTTATTTGAGGTATTCACCACATAAGTTCTATAACAATTCAAGTACTAATGATCTTGTTGATGGAAATCATGGACACCGAAAAATGGCTATAGTTTTGGCTGCATCTTCTGCTGTCTTGGCGCTTCTTTTGGTTGCTGCAACAATGGCTTTCTTTATAAGAAAGAATGTAATGAGGAGAAGAAAAGAGAGAAAACAATTTGGTACACTTTTGGACACAGTGAACAAATCCAAGCTAAATGTTCCATATGAAATTCTTGAAAAAGCAACAAATTACTTCAATGATGAGAATAAACTAGGACAAGGAGGATCAGGTTCAGTTTATAAAGGAGTTATGCCAGACGGAAAAACTGTGGCCGTTAAAAGACTTAGTTTTAACTCGACGCAATGGGTGGATCATTTCTTCAACGAGGTTAATTTGATTAGCGGAATTGATCACAAAAATCTTGTCAAGCTTTTGGGATGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTGCCTAACCAGAGCCTCTACGATTACCTATCTGTTAGAAGGATTTGTCAACCTCTTAGTTGGGAAGTGAGGCATAAGATCATATTGGGAATTGCAGAAGGCCTGGCTTACCTTCATGAGGAATCACATGTGAGAATCATTCATAGAGATATAAAATTAAGCAACATTCTTCTTGAGGATGACTTCACGCCCAAGATTGCCGATTTTGGACTAGCTAGATTGTTTCCAGAAGACAATTCTCACATAAGCACTGTTGTCGCCGGAACACTGGGTTATATGGCTCCTGAGTATGTGATTCGCGGGAAATTGACTGAGAAAGCAGATGTTTACAGTTTCGGAGTTCTAGTTATTGAAATTGTGTCCGGCAAAAAAAACAGTTCCTATGTTCTGAATTCATCTTCAATCCTTCAAACGGTTTGGAGTCTTTATGGATCAAATAAGCTCTCTGATATAGTTGATCCAATCCTAGAGGGAAACTTTCCTGCCGACGAAGCATGCCAAATGCTTCGGATAGGATTGCTTTGCGCACAAGCAACTGCAGAGTTGAGACCATCCATGTCAGTAGTTGCTAAAATGATTAATAACAATCATGAAATTCTTCAGCCAACGCAACCGCCCTTTATTTATTCGAGTAGCTCTGAACTCAGCAAATCCGTTTCACAAAGACGACATAATTTTCTTCCACAATCCAACACTCAATCTTCAGGCGATTCAATGACTGAAAGCTTGGTTGACCCTAGGTGA 1953 0.3978 MSSSPYFYFTLLFFCYYFASPTLSSDPGATKVLLLCTNKTATSMSFRRIFISNFLSAMDSLTPLISKQGYAAVSNGAQNATVFAYGECIKDLSQSDCNICIAQCKTQILSCLPFQKGTRGGRLLFDGCYIRYDEYSFFNESFSIQDATVCGSNETRNNVYEDNVLELVRNLSVLAPKNDGFSVGFVERKNVTVYGLAQCWKFVTGSNCRRCLEDAVTRIGSSCRKKEDGRALNSGCYLRYSPHKFYNNSSTNDLVDGNHGHRKMAIVLAASSAVLALLLVAATMAFFIRKNVMRRRKERKQFGTLLDTVNKSKLNVPYEILEKATNYFNDENKLGQGGSGSVYKGVMPDGKTVAVKRLSFNSTQWVDHFFNEVNLISGIDHKNLVKLLGCSITGPESLLVYEYVPNQSLYDYLSVRRICQPLSWEVRHKIILGIAEGLAYLHEESHVRIIHRDIKLSNILLEDDFTPKIADFGLARLFPEDNSHISTVVAGTLGYMAPEYVIRGKLTEKADVYSFGVLVIEIVSGKKNSSYVLNSSSILQTVWSLYGSNKLSDIVDPILEGNFPADEACQMLRIGLLCAQATAELRPSMSVVAKMINNNHEILQPTQPPFIYSSSSELSKSVSQRRHNFLPQSNTQSSGDSMTESLVDPR* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2670 650 Gene3D Phosphorylase Kinase; domain 1 288 403 - -
Psa4g2670 650 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Psa4g2670 650 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 20 638 - -
Psa4g2670 650 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 20 638 - -
Psa4g2670 650 SMART serkin_6 328 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2670 650 Gene3D - 29 137 IPR038408 -
Psa4g2670 650 Gene3D - 144 245 IPR038408 -
Psa4g2670 650 ProSiteProfiles Gnk2-homologous domain profile. 29 137 IPR002902 -
Psa4g2670 650 CDD STKc_IRAK 334 598 - -
Psa4g2670 650 ProSiteProfiles Protein kinase domain profile. 328 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2670 650 Gene3D Transferase(Phosphotransferase) domain 1 404 607 - -
Psa4g2670 650 Pfam Salt stress response/antifungal 150 241 IPR002902 -
Psa4g2670 650 Pfam Salt stress response/antifungal 45 135 IPR002902 -
Psa4g2670 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Psa4g2670 650 SUPERFAMILY Protein kinase-like (PK-like) 314 626 IPR011009 -
Psa4g2670 650 ProSiteProfiles Gnk2-homologous domain profile. 142 245 IPR002902 -
Psa4g2670 650 MobiDBLite consensus disorder prediction 623 650 - -
Psa4g2670 650 MobiDBLite consensus disorder prediction 623 644 - -
Psa4g2670 650 Pfam Protein kinase domain 328 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2670 Psa-Chr4 212386387 212389325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2670 20 493 Receptor kinase-like Gene Family AT1G70530 61.006 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa4g2670 Pkinase 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2670 - - gmx:100787359 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2670 4 212386387 212389325 Psa4g2670 4 212386387 212389325 ECH