Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2641 ATGGCAGACGAGACCTTTAGAGATGATTTGCAACAAAAACATCTTGGTCGCTTAAAAGATCAAGTTCGTTTGGTTAAAAGGAAAAACTGCGAACGATACGAGGTTGCTCCAATCAAAGACAAACTATCATTTGAGAATGGGTTTTTTATGGTATTCCATGCATGCAAGCTGTTGGTCCAGAAAAATGATGGAATGATATTAATAGGGGTGGGGGGTCCTTCGGGGGCTGGAAAGACTGTGTTAGCTGATAAGATATTCAACTCCATGCCTGACATTGCTGTTATTTCAATGGACAATTACAATGATTCTAGTCGAATTGTCGATGGAAACTTTGATGATCCACGTTTAACAGACTACGAAACATTGCTCCGAAATGTATGTGATTTAAAGGAAGGAAAGCCAGTTGAAGTTCCTGTGTATGATTTCAAATCCAGTTCACGTACAGGATACAGGACGGTCGAAGTCCCAAGCTCTCGTATTGTGATTATAGAGGGCATTTATGCTTTGAGTGAGAGGTTAAGACCTCTACTGGACCTTCGAGTATCTGTAACAGGAGGCATTCATCTTGACCTCATCAAACGAGTTATACGTGATATACAACGTGCTGGTCAAGAACCTCAAGAAATCATTCATCAAATATCTGAGACGGTATATCCAATGTACAAGGCTTATATTGAGCCAGATCTCCAAACAGCACATATAAAAATAACCAACAAGTTTAATCCATTTTTTGGATTCCAAAGCCCTACTTACATATTAAAGTCAACCAGGAATGTATCGGTGGATCAAATTAAAGCTGTTCTCTCACAAGATTTTGAGGAAACAACTGAGCAGACTTATGACATATATCTTCTACCACCCGGTGAAGATCCAGAGAGCTGTCAATCATATTTACGGATGCGAAATAAAGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACTGATGATCCATTCGTCATATCACCAAGAATTACTTTTGCGGTCAGTGTGCGTCTTCTTGGTGGACTTATGGCCCTTGGATACACAATAGCAACTATCCTTAAAAGAAGCAGCCATATCTTATCTGATGATGGGGTTTGTGTTAAACTAGATTGGCTTGAGCAACTAAATCGACATTATGTTCAGGTACAGGGAACAGATCGATTAGCTGTATCATACATAGCACAACAAATGGGTTTGGAAGGTTCATACATTCCCCGGACTTATATTGAGCAGATTCAACTTGAAAAGCTTGTAATGGCCATGCCAGATGGTTTAATAAGGAGAAAGCTTAACCTTACTGAGGATTTGGTGTCAAGCCCCAAAGCAGCACATTTTAGAACCTCTAGTGATGGGGCTCCCATGAGACATAAGCGTATCAGAAGTGATATGTCACAGTCATTTACAAATCAAGAGGATGAAGATCAAGCCAAAGTAACTGGATTCGTGCCGAACGATCGAGGACTTCATGAAAAAAATTGTTCAGATTCCGAAATGAAACTGGAAAATCAGGGTGCCATCACTCAGCTTTCAGAACAAATTGCTTCCCTGCATGATAGAATGGGCAAATTTTCAAATCGTATCGAAGAGCTGAACTCAAAGTTAACCACAAACGAAAATTGTCCAAACCAACAAAATATGGTCCTGCAATCTGAGTCGTATGATGGCTCTGCTCCCACCTCTTACTTCGTCACTTGTTTGAGTAATGGTTCCCTAACTGGATCTATAATGCCAAATTCCTTATTCCCACCACAATTAGCTAAGGATACACCTTTAAGAGATGAGATATCAGGTATTGCACAGGTTCAACGCCAGATAATGAATCAGTTGGACAATTTGAATAGTATTTTCTGTGCGAATTTGGAAGAGAAGCCTCATCAAACAAGAACCAACCGGAAAAGTGCTTCTTCTTCTTCTTCAGATTCCGGTGGACGTCATATAATAGCAGCAGTGGCTATTGGTTGTTTGAGCATCTTTGTAATGAAGGGTTTGTTAACCTGA 1986 0.4013 MADETFRDDLQQKHLGRLKDQVRLVKRKNCERYEVAPIKDKLSFENGFFMVFHACKLLVQKNDGMILIGVGGPSGAGKTVLADKIFNSMPDIAVISMDNYNDSSRIVDGNFDDPRLTDYETLLRNVCDLKEGKPVEVPVYDFKSSSRTGYRTVEVPSSRIVIIEGIYALSERLRPLLDLRVSVTGGIHLDLIKRVIRDIQRAGQEPQEIIHQISETVYPMYKAYIEPDLQTAHIKITNKFNPFFGFQSPTYILKSTRNVSVDQIKAVLSQDFEETTEQTYDIYLLPPGEDPESCQSYLRMRNKDGKYSLMFEEWVTDDPFVISPRITFAVSVRLLGGLMALGYTIATILKRSSHILSDDGVCVKLDWLEQLNRHYVQVQGTDRLAVSYIAQQMGLEGSYIPRTYIEQIQLEKLVMAMPDGLIRRKLNLTEDLVSSPKAAHFRTSSDGAPMRHKRIRSDMSQSFTNQEDEDQAKVTGFVPNDRGLHEKNCSDSEMKLENQGAITQLSEQIASLHDRMGKFSNRIEELNSKLTTNENCPNQQNMVLQSESYDGSAPTSYFVTCLSNGSLTGSIMPNSLFPPQLAKDTPLRDEISGIAQVQRQIMNQLDNLNSIFCANLEEKPHQTRTNRKSASSSSSDSGGRHIIAAVAIGCLSIFVMKGLLT* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2641 661 Pfam Phosphoribulokinase / Uridine kinase family 67 236 IPR006083 GO:0005524|GO:0016301
Psa4g2641 661 PANTHER URIDINE KINASE 8 638 - -
Psa4g2641 661 SUPERFAMILY CYTH-like phosphatases 261 407 IPR033469 -
Psa4g2641 661 CDD UMPK_like 67 239 - -
Psa4g2641 661 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Psa4g2641 661 PRINTS Uridine kinase signature 65 82 - -
Psa4g2641 661 PRINTS Uridine kinase signature 132 147 - -
Psa4g2641 661 PRINTS Uridine kinase signature 188 198 - -
Psa4g2641 661 PRINTS Uridine kinase signature 224 237 - -
Psa4g2641 661 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 8 638 - -
Psa4g2641 661 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 238 IPR027417 -
Psa4g2641 661 Gene3D - 65 247 IPR027417 -
Psa4g2641 661 Gene3D - 256 413 - -
Psa4g2641 661 Pfam CYTH domain 269 404 IPR023577 -
Psa4g2641 661 Coils Coil 509 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2641 Psa-Chr4 210597217 210603316 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2641 66 236 PRT Gene Family AT5G40870 28.889 2.62e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2641 K00876 - gmx:100781286 950.658