Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2636 ATGCAGGCCGAGGCGGAAATCTTGATTGATTTTAACACTCAACTTCATTCTGAGGCTGTTGTTTCTGTTCAAAATGGGGATCCGGGTGTTTCAAAATCTCTTGCGAATGATGTCGTTATGCCTCAGCAGCCAGCTCCGAAAAAACCAACAAGGCAGTGGGCTGCTTGGACTCGTCAAGAGGAGGAAAGCTTCTTCACCGCATTACGACAAGTTGGAAAGAATTTTGAGAAAATCACTTCCCGTGTACAAAGTAAAAACAAGGATCAGGTTAGGCATTATTACTATCGGCTTGTTAGACGGATGAACAAACTTCTTGGTCCAGAATTATGCCTGGATGCGAAAAACTCAAAAGATACCAATGCGGCAATGCTTCGCTGGTGGTCTTTATTGGAAAAGTATAGTTGCAAAGCCTCAAAGCTCCACCTAAAGCCCCGAAGGTTTAAAATATTTTTAGAAGCCTTGGAGCACCAACTTTTAAAGGACCGGAAGAAGAATGTAAAGAAGCGACCTTTGCAGGGTGGAAATTGTCAATCTCCTGCTCTTAACACTATCTCAAATCAATCAAATACCCGTGCAGTTAAAATGATTCTTGTTGAGAGTCAAAACATCATAAAACTTGGACCTTCAAAACCACCATTGAAGCGCAATGTGAACATGGGTGTTAACCGCAGTAATGCTAAGGGAGATTCAAATAACTCAAAACCTACAAGGCAGCGAAAGAAATCTGCTACGATCACAGCAGCTGCATATAGAAAATGGGAGAAGGCTGCAATGGCTGGCGTCTCTTTAGTTGCAGATGCTGCCGAGCATTTGGAGCGAGCTGCCACTGTTAAAGAGGTTGAACATGACCAGGAGAATCCAGGTAGCTATCACAGTGGAGGGGAAAAATGTTCTGATCCTGCCGATCATGTCCTTCCATCTTTACCCACATTTCCACAACATCACTATGTTGATAACAATGTACAGAATATTGTGAAACTTAAGCTCCAATTATTCCCAATTGATGAACCCACTCGAAGAGTCTTGGAAATGGAGAAGCATAATCCATACTTGGAGCTTACACTTAGTACACGAAAGAAGATATCATCAATTTTAGAACATCTAAACCGCAAATGGGGCAATTCAAGCATAGCAGTTGGAGAGTTGATGCTTTTTCCTTATGGTGTTCAAAAGGAAAACTTGAATAGTTATCAAAGATGGAACCAGGAATCTACTCTTAGTGCAGCAGATATATATGCAGTGATAGGAAGTCCACCTATATTCCGTTTGAGGTATGGTTGGTTCTCTAATGCTGAGCACGGAACATTAAATATGCAAGCACCTGTAGCATCCGGCTACATAGTTAGACAATCCAAAATTGGTGGTGATAATACGATGGATCAGATTGTGAATTTGGCACCGCTTCCTATGCCATCAACTAATAATTACTCTACGGAGTGCTCTGTAGATTGTGGAACATCCATGAACAAAAACAATGTTCTTACCTCTACTTCAACTTATTTGCCTAACACTAGAGACAGAAGTATATACCAGAATACAAGTACCGAGGAACCTTGTGGACCTACAGCCCATATATCATTGCATGAAAAAGATGTGACAGATGGAGCTGTATCTAGACAGTTGGAAGACATGGAGGAGTTGAAATCAAACAGTGGATCTGGCCTGTCAGCTGGTGAGTGGGCTGACAGCCTTACCAACATTAGTGTGGGGGACCTACTATCGGGAGTCTCCCAGGATCTCAATGATAATTGCATTGATCCTCTTATTGCTGAGAATTGTCGCAGTGTTCATCAAATTCCTTTTAGTAGCGATTCTTTTGATGCTGCTATTGCCGCTCACATATCTAGACATCAAGACAAGATGGGACAATCAACTATGGTATCTCATATGTCATCCATCTGGGATGCTGAAGAAACCTGTGATGCTTTCTCATTTAAAAAAGATCCTATTCGTCATGAAGACGGTCCTTGTTTTTCTCTCACTGCTGCTTTAGATGCTGATAAAAAGGTTCTTGAAAGAAGCTTTGAGAATTTGGATAAGCTTTCACCTGAAAAAGAGAGCCTTGTGGATGATATTGCTCAAACAGACCATATGCCTATGGACAGTTGCGAGTCTGGTGCAGATATCAAGTATCATTTAGCAAAGGATTTTACTGGGCTAGCAGATATGTATTGGCCTGATTCTTTGGGACCACTGGATTTGGAAATACCGTCTACTAAGTACAATAGCGATGATCCAATTTTAAGCGATAGTCTTAGTGGACTGAATCGCTTGATAGCCAGCAGCCTGGATGCATTCCAGAATTGCTCCTTTTTTGGGATTGACAAGAAGGAAGTACCATCGACAGTTGAGGCTCAAGAAACTGCCACTCTCTCAGATTTTAAAATTGGAAGTGGTATTTGA 2403 0.4161 MQAEAEILIDFNTQLHSEAVVSVQNGDPGVSKSLANDVVMPQQPAPKKPTRQWAAWTRQEEESFFTALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRRMNKLLGPELCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFLEALEHQLLKDRKKNVKKRPLQGGNCQSPALNTISNQSNTRAVKMILVESQNIIKLGPSKPPLKRNVNMGVNRSNAKGDSNNSKPTRQRKKSATITAAAYRKWEKAAMAGVSLVADAAEHLERAATVKEVEHDQENPGSYHSGGEKCSDPADHVLPSLPTFPQHHYVDNNVQNIVKLKLQLFPIDEPTRRVLEMEKHNPYLELTLSTRKKISSILEHLNRKWGNSSIAVGELMLFPYGVQKENLNSYQRWNQESTLSAADIYAVIGSPPIFRLRYGWFSNAEHGTLNMQAPVASGYIVRQSKIGGDNTMDQIVNLAPLPMPSTNNYSTECSVDCGTSMNKNNVLTSTSTYLPNTRDRSIYQNTSTEEPCGPTAHISLHEKDVTDGAVSRQLEDMEELKSNSGSGLSAGEWADSLTNISVGDLLSGVSQDLNDNCIDPLIAENCRSVHQIPFSSDSFDAAIAAHISRHQDKMGQSTMVSHMSSIWDAEETCDAFSFKKDPIRHEDGPCFSLTAALDADKKVLERSFENLDKLSPEKESLVDDIAQTDHMPMDSCESGADIKYHLAKDFTGLADMYWPDSLGPLDLEIPSTKYNSDDPILSDSLSGLNRLIASSLDAFQNCSFFGIDKKEVPSTVEAQETATLSDFKIGSGI* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2636 800 Gene3D - 7 105 - -
Psa4g2636 800 CDD SANT 55 98 IPR001005 -
Psa4g2636 800 ProSiteProfiles SANT domain profile. 56 102 IPR017884 -
Psa4g2636 800 PANTHER CRAMPED PROTEIN 41 765 - -
Psa4g2636 800 MobiDBLite consensus disorder prediction 221 243 - -
Psa4g2636 800 SMART sant 52 100 IPR001005 -
Psa4g2636 800 SUPERFAMILY Homeodomain-like 47 102 IPR009057 -
Psa4g2636 800 MobiDBLite consensus disorder prediction 221 244 - -
Psa4g2636 800 ProSiteProfiles Myb-like domain profile. 48 98 IPR001005 -
Psa4g2636 800 Pfam Myb-like DNA-binding domain 55 97 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2636 Psa-Chr4 210283777 210290752 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa4g2636 Myb_DNA-binding 5.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2636 - - aprc:113857455 1239.17