Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2633 ATGGATCATTTATTAACCCTTGAAACACCTTCTCCTTCATCCCATGTTCCTCCTGTTAACGCTAATGTTCCTGTTCCTGTTCACGTTCCTTCTCTCACTCCCAATCTTACTATGTCTCACCAAATCCCCAACATTTCTCCCGAAAATTTTAGGCTCGCTCCACCCACAACCACCACCATGTCCACCGAAAAATCATTCCCAACCTTACTCGTCCCCAAACCCGAACCCTTTGATGATTTCTTGGCTGCCCAAGATTCACAACAACCCCATTTCTCTCCTGGTTGCGAAGAAGACGATCAATCTGATCTTTACAATGAATTCTATCGGGTTTCGCAGCTCTTCAATGCTACTTTCGGTACATCTCTCGGTCCTTTCTTTGCGACCAACGATTCTGCCAATGTTGGTCCTTCTGTTGTTGAGGATACAGGCAACAACGTTTGTAACCCAGACCTGAATCTGAATCCTAATATAGCTGTGGAATCTACGGATTCTCAGTCGTATGATAACAATAACAATGATCTAGCTATTGTTGTTGTTCCGGAGAAACAAGAACAAGAGGCCACTGCGGCAGTTGCGGTGGCTAGGAAAAGGGCTAGCCAGGTGATGGAGCTCGTGAGGGTTTCAGATCTGAGTATGAAGGAGCATATAAATTGTCGGGAGGTGATTAGGAGGACAAGGATGGTGTATGATTCCCTTCGCGTGTTGGCGAGTATTGAAGAGGAAAAGAGATTTGCTGCGGAAGTTGCTGTTATGGAGGAAGAGAGGAGAGTGGCTGAGGAAAAAAGATTGGCTGAGGAGAGGAGATTGGCGGAAGAAGTTGCGGTTATGGAGGAGGAGATGAGGATAGGTGAGGAGAAGGGTGCTGCGGCTGCAGGGGGGGAGGTGGAAACGGAAACACCGAGTGGAAAAAAGAGGCGCATCCGCATTCGTGGTGATATGAGGGCGGCAGCGTTAATGAGGAAGAGTCAGTTGTGGCTGTATCGAGATAAGAGGATAGTTGGACCGATACCTGGGGTTTATGTTGGTGATGTGTTTCTTTTTAGGATGGAGTTGTGTGTAGTTGGTTTGCATATGCAGATACAAGCTGGAATTGATTATCTACCTAAAAGTCGGTGTTCCAATGGTGAACCAATTGCTACTAGTGTGATTGTTTCGGGTGGATATGAGGATGATATGGAGTTGGATGATGGTGATGTTATAATCTACACTGGCCATGGAGGGCAGGAGAAGAACTCCTCAAGGCAAATCTGTGATCAGAAATTGGTGGGTGGAAACCTTGCTTTGGAAAGGAGTATGCATTATGGGATCGAGGTTAGGGTTATTCGCGGAATGAAGTATGAAGGGAGTGCGTCCGGTTCTGGGAAGATTTATGTTTATGATGGAGTATATAGGATTGTGGAGTGTTGGTTTGATGTAGGAAAATCTGGTTTTGGAGTTTATAAGTATAAGCTTTTGAGAATTGAGGGGCAGGCTAAGATGGGTAGTGCCGTTCTCAAAGATGCTCGGGAAATTAGGAAAAGTGGGTTGGACTTTAAGCCTATGTATTGTCTTTCCGTTGATATTTCGGACAAGAGGGAGAAGGTTCCTATTAGACTTTTTAATGACATAGATGACAGTCAGGAACCTCTTTATTATCAGTATCTCCCGAATACTAGTTTCCCGCCGTTTGTGTTTCATCAGAGTGGGAAAGCTACTGGATGTGAGTGTGTCGAAGCTTGTACTGATGGTTGTTTTTGCTCTGTGAAGAATGGAGGAGAGCATCCTTATAATCTACAGGGGTTGCTTGTGAGAGGAAAGCCTTTGATTTTCGAATGTGGCCCTTTTTGCTCATGTCCTCCCAATTGTCGTAATCGTGTTGCGCAAAAGGGGCTCAAATATAGGTTGGAAGTGTTTAGGTCTACACAGACAGGTTGGGGAGTTAGGTCTCTGGACCTTATTCAGGCCGGAGCATTTATCTGCGAGTATACGGGGGTTGTTTTGACTAGAGAGCAAGCACAAATTTTAACAATGAACGGTGATTCGTTGATATATCCTAATCGGTTTTCAGATAGATGGGCAGAATGGGGGGATTTATCTCAGATATACACTGAATATGCGCGTCCGTCCTATCCATCCATTCCTCCTCTAGATTTTTCTCTGGATGTGTCAACAATGAGAAATGTTGCTTGCTATATGAGCCATAGTTCAAGTCCAAATGTATTTGTTCAGTTTGTTCTGTATGATCACAACAATTTGATGTTTCCTCATGTTATGCTATATGCAATTGAGAACATCCCTCCAATGAGAGAGCTAAGCATTGATTATGGCGTTGCTGATGAGTGGACGGGAAAACTCTCTATATGTATGTAA 2349 0.4436 MDHLLTLETPSPSSHVPPVNANVPVPVHVPSLTPNLTMSHQIPNISPENFRLAPPTTTTMSTEKSFPTLLVPKPEPFDDFLAAQDSQQPHFSPGCEEDDQSDLYNEFYRVSQLFNATFGTSLGPFFATNDSANVGPSVVEDTGNNVCNPDLNLNPNIAVESTDSQSYDNNNNDLAIVVVPEKQEQEATAAVAVARKRASQVMELVRVSDLSMKEHINCREVIRRTRMVYDSLRVLASIEEEKRFAAEVAVMEEERRVAEEKRLAEERRLAEEVAVMEEEMRIGEEKGAAAAGGEVETETPSGKKRRIRIRGDMRAAALMRKSQLWLYRDKRIVGPIPGVYVGDVFLFRMELCVVGLHMQIQAGIDYLPKSRCSNGEPIATSVIVSGGYEDDMELDDGDVIIYTGHGGQEKNSSRQICDQKLVGGNLALERSMHYGIEVRVIRGMKYEGSASGSGKIYVYDGVYRIVECWFDVGKSGFGVYKYKLLRIEGQAKMGSAVLKDAREIRKSGLDFKPMYCLSVDISDKREKVPIRLFNDIDDSQEPLYYQYLPNTSFPPFVFHQSGKATGCECVEACTDGCFCSVKNGGEHPYNLQGLLVRGKPLIFECGPFCSCPPNCRNRVAQKGLKYRLEVFRSTQTGWGVRSLDLIQAGAFICEYTGVVLTREQAQILTMNGDSLIYPNRFSDRWAEWGDLSQIYTEYARPSYPSIPPLDFSLDVSTMRNVACYMSHSSSPNVFVQFVLYDHNNLMFPHVMLYAIENIPPMRELSIDYGVADEWTGKLSICM* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2633 782 SMART preset_2 518 610 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Psa4g2633 782 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 57 779 - -
Psa4g2633 782 Pfam Pre-SET motif 521 618 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Psa4g2633 782 Gene3D - 331 494 IPR036987 -
Psa4g2633 782 SUPERFAMILY SET domain 511 781 IPR046341 -
Psa4g2633 782 Gene3D SET domain 495 782 IPR046341 -
Psa4g2633 782 ProSiteProfiles Pre-SET domain profile. 565 623 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Psa4g2633 782 ProSiteProfiles YDG domain profile. 334 486 IPR003105 -
Psa4g2633 782 SUPERFAMILY PUA domain-like 316 499 IPR015947 -
Psa4g2633 782 Coils Coil 248 268 - -
Psa4g2633 782 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 134 781 IPR025794 GO:0016571
Psa4g2633 782 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 57 779 - -
Psa4g2633 782 Pfam SAD/SRA domain 333 490 IPR003105 -
Psa4g2633 782 SMART G9a_1 329 490 IPR003105 -
Psa4g2633 782 SMART set_7 626 775 IPR001214 GO:0005515
Psa4g2633 782 Pfam SET domain 637 769 IPR001214 GO:0005515
Psa4g2633 782 ProSiteProfiles SET domain profile. 626 769 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2633 Psa-Chr4 209845820 209850627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2633 330 771 Su(var)3-9 homologs AT5G04940 41.834 1.42e-99 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Psa4g2633 SAD_SRA 8.9e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2633 K11420 - aip:107626851 898.271