Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2628 ATGGCTCGTTCATTGCCTTTGGTTTCCATAATCTTTGTCTTTCTTCTTCTTCTCGTAGCTACTGATATGGGACCAAGTATCGTGGCAGGGGCAGGCACTTGTCCATCACCAAGTACTAAATTCAAAGGAGTATGTGTGAGTGACTTCGATTGTATGATTACGTGCCAAATGGAGGGTTTATCTGAAGGAAAATGTCAAAGCTTGAAATGCATTTGCGCTAAACCTTGTTAA 231 0.4156 MARSLPLVSIIFVFLLLLVATDMGPSIVAGAGTCPSPSTKFKGVCVSDFDCMITCQMEGLSEGKCQSLKCICAKPC* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2628 76 Pfam Gamma-thionin family 33 76 - -
Psa4g2628 76 SMART gth_4 33 76 IPR003614 GO:0006952
Psa4g2628 76 ProSitePatterns Scorpion short toxins signature. 51 72 - -
Psa4g2628 76 PANTHER DEFENSIN-LIKE PROTEIN 1 1 76 - -
Psa4g2628 76 PANTHER DEFENSIN-LIKE PROTEIN P322 1 76 - -
Psa4g2628 76 SUPERFAMILY Scorpion toxin-like 33 76 IPR036574 -
Psa4g2628 76 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Psa4g2628 76 Gene3D - 31 76 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2628 Psa-Chr4 209586955 209587755 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2628 1 76 Plant Defensins Gene Families AT2G02140 47.368 1.49e-17 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2628 - - ini:109192069 71.2478