Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2606 ATGAGTAGCAGTGACGTAGATAAAACCTTAAAAGAAAAGGAGCCTAAGACGCCTCCAGTGGCTACATCACAGGAGCAGTCTTCAACGGCAACTGGTACTCCGGCAGTTAATCCCGAATGGGCTAATTATCAGGCATATTCTCCTATACCTCCGCCTGGATACATGGCATCAAGTCCCCAAGGCCACCCATATATGTGGGGTGTTCAGCATATTATGCCTCCCTATGGCACCCCACCACATCCTTATGTTGCAATGTATCCTCCCCATGGTGGCATATATGCTCATCCATCAATGCCTCCGGGGTCTTATCCTTTTAGTCCTTATGCCATGCCTTCTCCAAATGGTATGGTGGATGCTTCAGGAAATACTCCAGGAAGCAGTGAAGCTGATGGTAAACCTCAGGAGGTGAAGGAAAAGTTACCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGGTTACAGGAAAAAATAATGAACTCGGTAAACCACCAGGGGCATCGACCAATGGAATTCATTCCAAAAGTGGTGAGAGTGCAAGTGAAGGTACTAGTGAAGGAAGCGATGAAAACTCCCACAATGTTTTGCAGGATTCTCAATTGAAATCCGGGGAGAGACAGGATTCTTTTGAAGATGAGCCGTCTCAAAATGGAAGTTCAGCACATGCTCCTCAAAATGGAGTACTTAATACACCTCATACAGTTGTTAACCAGACTATGTCTGTCGTGCCTATGTCTGTTGCCGGTCCTCTCGCAGCAGTTCCTGGTCCCACTACTAATTTAAATATAGGAATGGATTACTGGGGAACACCAACTTCATCCACCATTCCTGCAATGCATGGAAAGGTACCTTCTAGTGCAGTTGCTGGAGGGATGGTTAATGCTGGGCCTAGAGATGGTGTTCATTCACAACCTTGGCTACAGGATGAAAGGGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCACGTAGATCCAGGTTGCGAAAGCAGGCTGAATGTGATGAATTAGCTCAGCGTGCTGATGTGTTGAGTGAAGAAAATGCCTCTCTCCGTGCTGAACTAAGCCGGATCAAGAGTGAGCACGCGAAAGCACTTGCTGAGAATGCAGCCCTCAAGGCGAAACAGGGGGAGATACCGAGGAACGAGGATATAGTGCCGGGCCAGAATGATCAGCATGTGGGTGGAGACACTAAACAAAGTGGTCAGAGTTAG 1227 0.4678 MSSSDVDKTLKEKEPKTPPVATSQEQSSTATGTPAVNPEWANYQAYSPIPPPGYMASSPQGHPYMWGVQHIMPPYGTPPHPYVAMYPPHGGIYAHPSMPPGSYPFSPYAMPSPNGMVDASGNTPGSSEADGKPQEVKEKLPIKRSKGSLGSLNMVTGKNNELGKPPGASTNGIHSKSGESASEGTSEGSDENSHNVLQDSQLKSGERQDSFEDEPSQNGSSAHAPQNGVLNTPHTVVNQTMSVVPMSVAGPLAAVPGPTTNLNIGMDYWGTPTSSTIPAMHGKVPSSAVAGGMVNAGPRDGVHSQPWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLSEENASLRAELSRIKSEHAKALAENAALKAKQGEIPRNEDIVPGQNDQHVGGDTKQSGQS* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2606 408 MobiDBLite consensus disorder prediction 1 15 - -
Psa4g2606 408 SMART brlzneu 311 375 IPR004827 GO:0003700|GO:0006355
Psa4g2606 408 Coils Coil 331 379 - -
Psa4g2606 408 MobiDBLite consensus disorder prediction 377 408 - -
Psa4g2606 408 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 313 365 IPR004827 GO:0003700|GO:0006355
Psa4g2606 408 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 407 - -
Psa4g2606 408 Pfam bZIP transcription factor 311 373 IPR004827 GO:0003700|GO:0006355
Psa4g2606 408 Gene3D - 314 369 - -
Psa4g2606 408 SUPERFAMILY Leucine zipper domain 314 367 IPR046347 GO:0003700|GO:0006355
Psa4g2606 408 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Psa4g2606 408 MobiDBLite consensus disorder prediction 1 36 - -
Psa4g2606 408 MobiDBLite consensus disorder prediction 305 320 - -
Psa4g2606 408 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 407 IPR044827 GO:0003700|GO:0006355|GO:0043565
Psa4g2606 408 MobiDBLite consensus disorder prediction 149 204 - -
Psa4g2606 408 MobiDBLite consensus disorder prediction 298 338 - -
Psa4g2606 408 CDD bZIP_plant_GBF1 316 367 IPR045314 GO:0003700|GO:0006355
Psa4g2606 408 Pfam Disordered region downstream of MFMR 138 278 - -
Psa4g2606 408 MobiDBLite consensus disorder prediction 214 229 - -
Psa4g2606 408 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 318 333 IPR004827 GO:0003700|GO:0006355
Psa4g2606 408 MobiDBLite consensus disorder prediction 19 36 - -
Psa4g2606 408 MobiDBLite consensus disorder prediction 120 229 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2606 1 406 bZIP Transcription Factor Family AT2G35530 62.379 1.50e-166 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa4g2606 MFMR_assoc 7.8e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2606 K09060 - gmx:778122 612.838