Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2599 ATGGAAATGCAAAGTGTGATGCTCTTTTTGGTATTCTTATGGGCTCAAGTTCATCTTGTCTCTTCATTTACTGATCCTCAAGATGTTTCTGCACTTAGATCTCTAAAAGATATATGGAAGAATACACCACCAAGTTGGGACAAATCAGATGACCCTTGTGGAGCACCATGGGACGGAGTGACCTGCAGCAAATCAAGGGTTACTTCATTGGGACTTTCAACCATGGGACTGAAGGGAACATTAAGTGGAGATATTGGTGGACTCACAGAATTAAGATCCTTGGACTTATCCTTTAATAAAGGTTTAATGGGGTCTATCTCTCCAGAATTGGGAGAATTAAAAAACCTAAATATATTGATTTTGGCTGGTTGTAGTTTCAGTGGCAAGATTCCAGATGCATTAGGGAATCTTTCAGACCTATCTTTCTTGGCTTTAAATTCAAACAACTTCACTGGAAAAATACCTTCATCATTAGGTAAACTCTCCAAACTTTATTGGTTGGACTTGGCAGATAACCAGCTAACAGGACCTCTCCCGGTTTCAACCTCGACATCCCCCGGCTTAGACCAACTTTTACATGCTAAGCACTTCCATTTCAACAAGAACCAGCTTTCTGGTTCCATTTCTCCCAAACTTTTCCACTCTGACATGGTACTCATTCACATATTATTAGATGGAAATCACTTAAGCGGGAGTATACCTTCGACTATAGGACTAGTTCATACAGTCGAGGTTCTTCGGCTCGATAGAAATTTCTTGACAGGAGAAGTCCCTTCGAATCTCAACAAACTTAGTAACATCAATGAATTGAATTTAGCACACAACAAATTGTCAGGTCCTTTGCCGGACTTAACATCAATGGATACCCTAAATTATGTGGATCTTAGTAACAATTCCTTTGATCCATCAGAAGCTCCAACTTGGTTCTCATCTCTACCGCAACTCACCACACTTATTATGGAGTTTGGATCTCTTGAAGGTACTCTTCCATCAGACGTCTTCAGCCTTCCTCAAATACAACAAATAAAACTAAGACACAATGCATTGAACAATACACTTGAAATGGGAGACAACATTTGTCCTCAGTTGCAGCTTGTGGATTTACAAGACAACCAGATTGCATACGTAACAGTCGGTTCACAGTACAAAAACACATTGATTCTCATAGGAAATCCAGTATGCAGTACTGGTCTCCTCTCTAATACAAACGACTGCAACCTCCAGCAACAGCCGAAACAACCCTATTCGACTAGCTTGGCTAACTGCGGAGGAAGATCATGTCCACCGGATCAAAATCTCAGTCCACAAAGTTGCGAATGTGCATATCCGTATCAAGGAACGTTTTATTTTAGGGGACCTTCTTTTAGAGAACTCACTAACATAACTATTTTCCATTCACTTGAAATGAGCTTATGGGTGAAATTGAGTTTAACACCAGGCTCAGTTTCATTACAAAACCCTTTTTTCAATGGTGATGATTATCTTCAAATGCAACTAGCACTCTTTCCACCAACAGGACAATATTTCAATAGGTCAGAAGTTCAAAGAATCGGATTTTCATTGAGTAATCAAACGTACAAGCCTCCGCATGAATTTGGACCCTATTACTTCATTGCATTTCCTTATTCTTTTTCAGATTCGCGCAGAGGAACTTCTCTTAGCAGAGGTGCTATTATTTTGATAGCAACTGGAAGTACAGTTCTGATTCTGTGCCTTATAGGGCTAGCTATATATGCAATCCTGCAAAAGAAGCGCGCGGAGAACGCTATTGGAATAAGTAGACCGTTCGCATCTTGGGCACCAAGTGGCAAGGATAGTGGAGGTGCACCACAATTGAAGGGAGCAAGATGGTTCTCTTACGATGAACTCAAAAAGTGTACCGATAACTTCTCTGGAAGCAACGAGTTAGGCTTTGGTGGCTACGGCAAGGTGTACAAAGGGGTGTTCCCTGATGGAAAAATAGTTGCAATTAAAAGAGCTCAGCAAGGATCGATGCAAGGAGGTCTAGAGTTCAAGAACGAAATCGAATTGCTTTCAAGAGTTCATCACAAGAATCTTGTTAGCCTTGTTGGATTCTGCTTTGAACAGGGAGAACAGATGTTGGTTTATGAATTCATCTACAATGGATCACTTAGGGAGGGTTTATCAGGGAAATCTGGTATTCAACTTGATTGGAAGAGGAGACTCCGTATTGCTCTCGGCTCAGCTAGAGGACTTGCATACTTACACGAACTTGCCAATCCTCCCATAATCCACAGAGATGTGAAGTCAACCAATATCTTGCTAGATGAAAATTTGACTGCAAAGGTTGCGGATTTTGGCCTGTCTAAGCTTGTATCAGACAGTGACAAAAGCCATGTCTCAACTCAGGTTAAAGGAACATTGGGCTATCTAGATCCTGAATATTACATGACTCAACAACTAACCGAAAAGAGTGACGTATACAGTTTCGGTGTAGTTATGCTTGAACTGATAACATCCAAGCAACCTCTCGAAAAGGGTAAGTACATAGTTCGTGAGGTTCGAAACTTAATGAATAATAGAGATGAAGAGTACCATGGTTTAAGCGAAGTAATGGATCCATTGGTTAGAAACACAGCCAACCAGGCAGGATTTGGCAGGTTCATAGAGTTGGCAATGCAATGCGTCGAGGAATCGGCTTCAGACCGACCAACAATGAGTGAAGTTGTGAAAGCGTTAGAAACCATATTACAGAATGATGGTTTGAACACAAATTCTACTTCTGCTTCTTCATCTGCTACTGATTTTGGAGTGTCTAAGGGTGCTGCAAAGAGACATCCTTACATTGATAATAGTTTTACCAAGAAGGATAGTGTTGATGAGAGTAATGCCTTTGATTACAGTGGAGGGTACACACTTTCAACCAAAGTGGAACCTAAATAG 2904 0.4084 MEMQSVMLFLVFLWAQVHLVSSFTDPQDVSALRSLKDIWKNTPPSWDKSDDPCGAPWDGVTCSKSRVTSLGLSTMGLKGTLSGDIGGLTELRSLDLSFNKGLMGSISPELGELKNLNILILAGCSFSGKIPDALGNLSDLSFLALNSNNFTGKIPSSLGKLSKLYWLDLADNQLTGPLPVSTSTSPGLDQLLHAKHFHFNKNQLSGSISPKLFHSDMVLIHILLDGNHLSGSIPSTIGLVHTVEVLRLDRNFLTGEVPSNLNKLSNINELNLAHNKLSGPLPDLTSMDTLNYVDLSNNSFDPSEAPTWFSSLPQLTTLIMEFGSLEGTLPSDVFSLPQIQQIKLRHNALNNTLEMGDNICPQLQLVDLQDNQIAYVTVGSQYKNTLILIGNPVCSTGLLSNTNDCNLQQQPKQPYSTSLANCGGRSCPPDQNLSPQSCECAYPYQGTFYFRGPSFRELTNITIFHSLEMSLWVKLSLTPGSVSLQNPFFNGDDYLQMQLALFPPTGQYFNRSEVQRIGFSLSNQTYKPPHEFGPYYFIAFPYSFSDSRRGTSLSRGAIILIATGSTVLILCLIGLAIYAILQKKRAENAIGISRPFASWAPSGKDSGGAPQLKGARWFSYDELKKCTDNFSGSNELGFGGYGKVYKGVFPDGKIVAIKRAQQGSMQGGLEFKNEIELLSRVHHKNLVSLVGFCFEQGEQMLVYEFIYNGSLREGLSGKSGIQLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSDKSHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITSKQPLEKGKYIVREVRNLMNNRDEEYHGLSEVMDPLVRNTANQAGFGRFIELAMQCVEESASDRPTMSEVVKALETILQNDGLNTNSTSASSSATDFGVSKGAAKRHPYIDNSFTKKDSVDESNAFDYSGGYTLSTKVEPK* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2599 967 CDD STKc_IRAK 636 903 - -
Psa4g2599 967 SUPERFAMILY Protein kinase-like (PK-like) 615 912 IPR011009 -
Psa4g2599 967 Pfam Protein tyrosine and serine/threonine kinase 634 900 IPR001245 GO:0004672|GO:0006468
Psa4g2599 967 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Psa4g2599 967 Gene3D Ribonuclease Inhibitor 287 396 IPR032675 -
Psa4g2599 967 Gene3D Phosphorylase Kinase; domain 1 604 705 - -
Psa4g2599 967 ProSiteProfiles Protein kinase domain profile. 630 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2599 967 Gene3D Transferase(Phosphotransferase) domain 1 706 926 - -
Psa4g2599 967 PANTHER LRR RECEPTOR-LIKE KINASE 1 936 - -
Psa4g2599 967 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 936 - -
Psa4g2599 967 SMART serkin_6 630 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2599 967 ProSitePatterns Protein kinases ATP-binding region signature. 636 658 IPR017441 GO:0005524
Psa4g2599 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Psa4g2599 967 Gene3D Ribonuclease Inhibitor 183 286 IPR032675 -
Psa4g2599 967 SUPERFAMILY L domain-like 32 395 - -
Psa4g2599 967 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2599 Psa-Chr4 207573562 207579516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2599 5 967 Receptor kinase-like Gene Family AT1G79620 68.072 0.0 1379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Psa4g2599 PK_Tyr_Ser-Thr 8.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2599 - - gmx:100792249 1629.38