Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2595 ATGGATGAGGTTAGACCTGAAGGTAGTAGTAGTTGTAGTACTGAAGCGGAGCAGACTCAGTCCAGAGACACGATTGTTGAAACGGCGCCTTCTTTCTCTCCATCAGGATGGTGTCCCAGGGAGCTTGCCTTTGCTCCTTTTGTGCCGCTGGTTGAAGACCAGCAACAAAAAGAAGATAAACGAGTTAATGCTGCTGGAAAGTTCTCAAAGTATCGTGCATTTGTTAGGAAGCCTTTGGTGGCAAGATTGACCAAGGAAATAGTTGAAACATATCAAATATGCAATCCACAGTTTAAATATTCCGAAGATCTAAATCCAAAGAGATTTTTGACCAGCCCATCTACCGGAGTGCTTAATGATGGCTATGATAATCTAAACTCAGATCTTATTCTGACAGTGAATTTGGTCTTGATTCATGTAGAGAAAAGTAGAAGATATACTGTCAAAGATCTCCTTGGCCACGGGACATTTGGACAAGTGGCCAAATGCTGGGATTCAGATACCAACAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCTGCATACTATCAACAGGCGCTGGTTGAAGTAACTATTTTAACAACGCTAAATAAGAAGTACGACCCTGAGGATAAGCATCACATTGTTCGTATATTTGATTATTTTGTATATCAGCGGCATTTGTGCATATGCTTTGAACTGCTGGACACAAACCTGTATGAGCTTATCAAAATGAATCATTTTAGGGGATTGTCACTTGGTATTGTTCAGCTGTTCTCCAAGCAGATTTTATGTGGATTGGCTCTATTAAAAGATGCTGGCATTATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTGCGAGCACTGTGAAGCCAGCAGAAATAAAGATTATTGACTTTGGATCAGCATGCATGGAAAACCGCACTGTATATTCCTATATTCAGAGTCGATACTATAGGTCTCCTGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCGGAATTATTTCTCGGATTACCATTATTCCCTGGGGCTTCAGAATTTGATCTTTTGAAAAGGATGATTGAAATAATTGGAGGACAACCACCTGATTATGTACTACGTGACGCTAAAAACACTAGTAAATTCTTTAAGTGTATTGGGAGTCTCCAAAACATAGAAATCAGCGAGGGTTCCAAAAATGGAAGTGTTTATCAAGCATTGACAGAGGAAGAATATGAAGCTAGAGATTTGAAGAAGCCATCAATTGGAAAAGAGTATTTTAAGCATATGAATCTTGAAGCAATTGTTTCAAACTACCCCTACAGGAAAAACCTACCTCAGGAAGATATTGCCAAAGAAAGTCAAATACGATTGGCTCTTATTGACTTTTTGAGAGGGCTTGTTGAATTTGACCCTGCAAAACGTTGGTCTCCCTTTCAGGCTTCCAAACACCCTTTTGTAACTGGGGAACCTTTTACTCACCCTTACAGACCTTCCCCCGAGACACCTCACATTCCGGTAGTTCAAAATATCAAGGTTGATAATCATAAAGGTGGAGGGCACTGGTTTGCTGCTGGCCTATCACCAAATGTTGCAGGAAAAAACAGAGCTTCCCTCTATAGTAGTCCACATTTTCAGATGGTGCAACATCCACCTGCAAATAGTTTTGGTAGTGTTGGAAGCCATGGGAGCTATAATGATAATGCTGGGCTTGGAAGCAGCTATGGCAGTTATGGAGAGAGCAGTAACATGTTTGCTTATTATTCACCTATTGGTCCATCTGGCATGAATATGCACAGTCAGGGTGGTATGGCAATGCTTGGAAATAGTCCTGATGCTCGAAGAAGAGTTAAGTACCAACCGGGGAATGGATTGGGTGTAAGTCCATCTGGTGGAAATTTTGCTCCCTTGCCTCTTGGTGCCAGTCCATCTCAATTTACTCCACCAAGTTCATATAGTCAGATTTCAGTTGGTTCACCAGGACATTTTGGACCTACATCTCCTGCAAGAGGAACCTCTCATGGATCCCCTTTAGGCAAGTCGGCTGCAGTTAGCCAGTTTAATAGAAGGAAAAACTGGGGGCATTCTGGAAGTCCACAAACCCAAGAAACAACTTTTTCTTCACATTGGCATGGTCAATATCCTGATAGCTTAAGTCAAGCTGAGGGAACATCACAGGCTCCTGGCAGTTCACCATCATATCTACAATCAAATATTAATCCTGGAAACTGGAAGCAGCGTGGAAGCTTATCTGCTAATCAGAACATTCCATCCATGATTATGCCTGGTTCTAATATGAACTCACAATCAACTGAATTGCTTCATGACAATATGGAGACAGGTTTTTCACTGCCTGACCCTGGAGATTGGGACCCTAATTATAGTGATGAACTTCTTCTGCAAGAAGGTGGTTCAGATGAAAGCTCTTTGACAACTGAGTTTGGCAGAAGTATGAATCTTGTTTCCAGTGAACCATGGTCTGGATTCGGAAGGTTGGACCATGTCTCCAACTCAAGTTCTCCAATAACCATGCAGAGACTAAATGGACCTGGTCAAACATTTTCTAATGTTGAGATGGGTAGCTCCCCAACACATGATCCCCAAGCAGCATATATACCTTCTATCTCAAAGCCTTTTCATCTCATGCCGCATGTTTTACAAAATTCTCCAAGCCGTTTTGGACACCAATCTGTTCAAAGATTTACACATGGTAGACCTCCTCAGGGTAGTGACTGGAATCAAATTAAGATTCAGGCTCCTTCTGGTTTCAGCAATGTGGGCCCGCGTTCTCCCAGGAATGCCTCATTCACCGGCAGTATGACGTGGGGGCGAAGAATGAATCCTCCTATCTCAAGCATTCCTCCTATCTCAAACATACCGCCCTCATCTCGTTCAAGAAAAGACTATGCAAGGATAGACTAG 2925 0.4195 MDEVRPEGSSSCSTEAEQTQSRDTIVETAPSFSPSGWCPRELAFAPFVPLVEDQQQKEDKRVNAAGKFSKYRAFVRKPLVARLTKEIVETYQICNPQFKYSEDLNPKRFLTSPSTGVLNDGYDNLNSDLILTVNLVLIHVEKSRRYTVKDLLGHGTFGQVAKCWDSDTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIFDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLGIVQLFSKQILCGLALLKDAGIIHCDLKPENILLCASTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLKRMIEIIGGQPPDYVLRDAKNTSKFFKCIGSLQNIEISEGSKNGSVYQALTEEEYEARDLKKPSIGKEYFKHMNLEAIVSNYPYRKNLPQEDIAKESQIRLALIDFLRGLVEFDPAKRWSPFQASKHPFVTGEPFTHPYRPSPETPHIPVVQNIKVDNHKGGGHWFAAGLSPNVAGKNRASLYSSPHFQMVQHPPANSFGSVGSHGSYNDNAGLGSSYGSYGESSNMFAYYSPIGPSGMNMHSQGGMAMLGNSPDARRRVKYQPGNGLGVSPSGGNFAPLPLGASPSQFTPPSSYSQISVGSPGHFGPTSPARGTSHGSPLGKSAAVSQFNRRKNWGHSGSPQTQETTFSSHWHGQYPDSLSQAEGTSQAPGSSPSYLQSNINPGNWKQRGSLSANQNIPSMIMPGSNMNSQSTELLHDNMETGFSLPDPGDWDPNYSDELLLQEGGSDESSLTTEFGRSMNLVSSEPWSGFGRLDHVSNSSSPITMQRLNGPGQTFSNVEMGSSPTHDPQAAYIPSISKPFHLMPHVLQNSPSRFGHQSVQRFTHGRPPQGSDWNQIKIQAPSGFSNVGPRSPRNASFTGSMTWGRRMNPPISSIPPISNIPPSSRSRKDYARID* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2595 974 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Psa4g2595 974 SUPERFAMILY Protein kinase-like (PK-like) 140 510 IPR011009 -
Psa4g2595 974 ProSiteProfiles Protein kinase domain profile. 146 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2595 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Psa4g2595 974 MobiDBLite consensus disorder prediction 7 31 - -
Psa4g2595 974 PANTHER BNAC04G29850D PROTEIN 72 906 - -
Psa4g2595 974 MobiDBLite consensus disorder prediction 922 974 - -
Psa4g2595 974 Gene3D Transferase(Phosphotransferase) domain 1 227 489 - -
Psa4g2595 974 MobiDBLite consensus disorder prediction 647 681 - -
Psa4g2595 974 MobiDBLite consensus disorder prediction 1 33 - -
Psa4g2595 974 PANTHER DUAL SPECIFICITY PROTEIN KINASE 72 906 - -
Psa4g2595 974 Gene3D Phosphorylase Kinase; domain 1 110 226 - -
Psa4g2595 974 CDD PKc_YAK1 146 488 - -
Psa4g2595 974 SMART serkin_6 146 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2595 974 Pfam Protein kinase domain 146 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2595 974 MobiDBLite consensus disorder prediction 647 662 - -
Psa4g2595 974 MobiDBLite consensus disorder prediction 922 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2595 Psa-Chr4 207387194 207400814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2595 142 375 MAP Kinase Gene Family AT1G18150 34.538 3.70e-32 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Psa4g2595 Pkinase 7.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2595 K18670 - gmx:100792777 1645.17