Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2573 ATGTTTACATGCATAGCTTGTACGAAACAAACATCAGATGAGAGGGATGAAGATGGTCGTGAGAGTGGCACGCCTAGTACTAAAGAAGCTGTCAAAAGCATTACCACACAGATAAAAGATATGGCCTTAAAGTTTTCGGGTGCTTACAAGCAATGCAAACCATGCACGGGAGGATCGAGTAGCTACAACAAGAAAGGACATAGACCATATCCCGACTTCGACACAATCTCAGAAGGGGTTCCATACCCTTATATTGGAGGTGCAAGCTCAAGTTCAACCCCTGCATGGGATTTCACTACTTCTAACTACCCTGGTGCAAGATATGCCGGAGACCGCACCCCTAGAGGACGCGACTCTGCGTCAGTCTGTGATGTTGTGTTAGAGGATGAGGATGAACCGAAGGAATGGATGGCACAGGTTGAGCCAGGAGTTCATATTACCTTTGTTTCTCTTCCTAATGGTGGAAATGATCTCAAGAGAATTCGCTTCAGCCGAGAGATGTTCAATAAATGGCAAGCTCAAAAATGGTGGGGCGAGAATTACGACAGAATCATGGAGCTTTACAATGTCCAAAGATTTAATCGACAAGCTCTCAACACTCCTCCAAGATCCGAAGCCGATGAGCAACGCGATTCTACTTACTCGAGATTGACATCAGCAAGAGAAAGTCCTATGGCGTCGGTCAAGGATTGGACGCCAAGGAGTCACTACAAACCCTCAGGAATGTCGGATCAAGGCGGAGGCCATCTCTATCAAGGAGGTTCATCAATGGAACCATCAAGAGCAACTACTTCCTCTAGAGATGAACCTTCTATTAGCAATGCAAGTGAAATGGAGTCAGAATGGGTAGAACAAGATGAGCCTGGAGTTTACATTACAATCAGACAGTTAGCCGATGGTACGAGGGAGCTTAGACGTGTCCGATTCAGCCGAGAAAGATTCGGCGAGGTAAATGCAAAAACATGGTGGGAAGAGAACAGAGAAAGAATACAAGCTCAATACCTTTGA 1008 0.4573 MFTCIACTKQTSDERDEDGRESGTPSTKEAVKSITTQIKDMALKFSGAYKQCKPCTGGSSSYNKKGHRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTTSNYPGARYAGDRTPRGRDSASVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQKWWGENYDRIMELYNVQRFNRQALNTPPRSEADEQRDSTYSRLTSARESPMASVKDWTPRSHYKPSGMSDQGGGHLYQGGSSMEPSRATTSSRDEPSISNASEMESEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQAQYL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2573 335 MobiDBLite consensus disorder prediction 10 25 - -
Psa4g2573 335 ProSiteProfiles BRX domain profile. 134 189 IPR013591 -
Psa4g2573 335 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 335 IPR044532 -
Psa4g2573 335 Pfam Transcription factor regulating root and shoot growth via Pin3 279 334 IPR013591 -
Psa4g2573 335 Pfam Transcription factor regulating root and shoot growth via Pin3 134 188 IPR013591 -
Psa4g2573 335 MobiDBLite consensus disorder prediction 256 279 - -
Psa4g2573 335 ProSiteProfiles BRX domain profile. 280 335 IPR013591 -
Psa4g2573 335 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 335 - -
Psa4g2573 335 MobiDBLite consensus disorder prediction 198 284 - -
Psa4g2573 335 Pfam Transcription factor BRX N-terminal domain 22 55 IPR027988 -
Psa4g2573 335 MobiDBLite consensus disorder prediction 10 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2573 Psa-Chr4 206029575 206033799 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2573 1 335 Major Intrinsic Protein MIP AT1G31880 68.466 1.13e-165 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2573 - - ccaj:109789470 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2573 4 206029575 206033799 Psa4g2573 4 206029575 206033799 ECH