Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2570 ATGATATATCTCAATTTTCCTCCAAGGGAAGCAATTATAGACTGGAATGGAAATGCCTTCAAGAAGATGAAAAATCTCAAAACACTGATCATAAAAAATGGTCGTTTTTCCAAAGGTTCCCGACATCTTCCAAGTGGTTTGAGAGTATTAGAATGGCCAAGATATCCTTTAGGATGTATACCCTTTAGCATTTCGAATAAGACATTTGAGAAGATGAAAATTTTAAAATTTGACTATTGTGAATATCTGACAGATATATCTGACGTCTCGTGTCTCCCAAATTTAGAAATCTTTTCATTCAAAAATTGCGAGAATTTAATTTCAATTGATGAGTCTATTGGGTTCCTCGATAAGCTTCAAATCTTGAATGCTGAGGGCTGTGACAAGTTATCGAGTTTTCCACCTTTAAAGTTGAACTCTCTTCTAGAGCTAGAACTTTCATTATGTACAAGTCTCAAGAAATTTCCTGAAATATTGGACAAGATGAATAATATTAACCGTATATTTTTGATAGACACTGGCATAAAAGAATTTCCATCTTCATTTCAAAATCTTACCGAACTTCATAGCTTATCAATACATGGACATGGAAAACTTGAATTTCCAAGCAGCATTCCCATGATGTCAAAGTTGTTCCAAGTTGATATTCATGGTTATAGTCAGTTACTCACAAAACCGAATGATGAAATGAGTTCCTTGTTGTCTTCCAATGTGAGAGAAATTTTTATTCGAACAAGCAAACATAAACTTCTAACAGTGACTCTTACCTTGTTTTCTAATGTGGAAACCTTAAACATAACGGGTAGCAATATCAAAATTCTTCCTGAATTCATAAAAAAATGTTGCTTTCTAAAGAGCATTTACTTAGATAGTTGCAAATATCTTGAAGAAATAAGAGGGATTCCGCCAAATCTTAAAACATTGTCTGCATTTGGGTGCGAATCATTGACTTCATCGAGTAAAAGCATGCTAGTGAGCCAGGAACTGCATGAGGCTGGAGGCACTGAGTTTCGTTTTCCATCGTCACGAAGTGAGTTGATTCCTGAGTGGTTTGAGCATCAAAGAAGAGAACATTCAATTTCTTTTTCGTTCCGTAACGACTTCCCTTCCTTGGTTTTCTTCTTTTCTTCTATAAGAATGCATCAATTTGTCCATTGGACAAGAGATTCAGGATTAAGAGTCTTTTTGCTCATCAATGACTATGCATTTACTCTTGATGAGCCTGACTTTGATATGTCTTGTGATATTCCACGGGATTATACATATATATTTTCTTCAGATAGGAAAACCTGGTCAGAACTACCGGACTATACACCAAAGGGACACCGAGAATTCGAATCTATGTTGGAGGATGCAGTTTTGAAAAGTGAATGGATTCATGCTGAAGTTAAGATTGCGAGTGATTTGAATGATGATGTTGAAAGTGGAATCCACGTACTCAAACATTTAACTAGCATGGATGATATTCAATTCACTATTTCTTCCTTACTCAAAAAGAGAAAATTCGATGAATTTCTGAATGATTCAGCATCAGAATGA 1539 0.3515 MIYLNFPPREAIIDWNGNAFKKMKNLKTLIIKNGRFSKGSRHLPSGLRVLEWPRYPLGCIPFSISNKTFEKMKILKFDYCEYLTDISDVSCLPNLEIFSFKNCENLISIDESIGFLDKLQILNAEGCDKLSSFPPLKLNSLLELELSLCTSLKKFPEILDKMNNINRIFLIDTGIKEFPSSFQNLTELHSLSIHGHGKLEFPSSIPMMSKLFQVDIHGYSQLLTKPNDEMSSLLSSNVREIFIRTSKHKLLTVTLTLFSNVETLNITGSNIKILPEFIKKCCFLKSIYLDSCKYLEEIRGIPPNLKTLSAFGCESLTSSSKSMLVSQELHEAGGTEFRFPSSRSELIPEWFEHQRREHSISFSFRNDFPSLVFFFSSIRMHQFVHWTRDSGLRVFLLINDYAFTLDEPDFDMSCDIPRDYTYIFSSDRKTWSELPDYTPKGHREFESMLEDAVLKSEWIHAEVKIASDLNDDVESGIHVLKHLTSMDDIQFTISSLLKKRKFDEFLNDSASE* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2570 512 Gene3D Ribonuclease Inhibitor 9 152 IPR032675 -
Psa4g2570 512 Gene3D Ribonuclease Inhibitor 153 332 IPR032675 -
Psa4g2570 512 PANTHER NB-ARC DOMAIN PROTEIN 3 380 - -
Psa4g2570 512 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 380 IPR044974 GO:0006952
Psa4g2570 512 SUPERFAMILY L domain-like 10 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2570 Psa-Chr4 205972303 205974358 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2570 14 218 WRKY Transcription Factor Family AT4G12020 33.333 3.36e-21 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2570 - - mtr:MTR_6g072460 537.339