Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2569 ATGGAGAGGTACAAATTAATTAAGGAAGTTGGGGATGGAACATTTGGGAGTGTCTGGAGAGCTATTAATAAGCAAAGCGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAAAAGTATTACTCTTGGGAGGAGTGTGTAAACTTAAGTGAAGTCAAGTCATTACGAAAAATGAATCACTCAAATATTGTGAAGCTGAAGGAAGTTATTCGAGAATGTGACATTCTGTACCTTGTTTTTGAGTACATGGAATGCAACCTCTACCAACTTATGAAAAAAAGGGAAAAGCTGTTTTCTGAGGATGAAGTTAGAAACTGGTGTTTTCAAGTTTTCCAAGGTCTTGCATACATGCACCAGCGTGGATACTTCCACCGTGATCTAAAGCCTGAAAACTTGCTTGTCACCAAGAATATTATCAAAGTTTCTGATTTCGGCTTAGTACGAGAGATCAGCTCACAACCACCCTATACTGAGTATGTCTCCACACGGTGGTATCGTGCCCCTGAAGTCTTGCTTCAGTCTTTCCTTTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATTATGGCTGAGTTGTTCACTCTCCGTCCTCTATTTCCGGGTACCAGTGAGGCAGATGAGATCTACAAAATATGCAGTGTGATAGGTAGTCCAACCGCTGAATCTTGGGCTGATGGACTCAAACTTGCTAAGGATATCAACTATCAGTTTCCACAGCTAGCTACCACAGATCTCTCTGTACTGATTCCATCCAGAAGCGATGATGCAATCAACCTTATCAAATCACTTTGTTCATGGGATCCCTGCAAGAGACCTGCTGCAGCAGAGGTCCTTCAACATCCTTTCTTCAAGAGCTGCTTTTACATCCCTCCATCGCTTCGCACCAGAGCAGTAACCAGAACTCCTCCATCTGCCGGAATAAGGGGATCAGTGGATCGACAAGGGGTCAGGAAATATTCTGGTGCATTGCCTAATTCGAAAATTGGCAATAATTTTTCTTCCATGAAATTACATCCTTCTGTAGCTCCAGGCGTGCAACGGAAGCTGGATATGGCAAACGAGGATGGAATTAAAAATAAGAAATCAATGAAGACTACTACTCCACAATCAAAATATCAACCGCCAGGAAAAGGCAGCCCAAGTTCTTTAAACAAGGGGAGAACCGCACGTAGTGTTTCGGAAACAGCTGACAAGTTGGCCAACATGTCAATTTCTACTCGAAGACATTCATTGAGTCAAGCCCGTCCACCTCCAATGAAAGCCGGAGTTAATTGGAGTTCTGAATCTGGAAACATCCTGCTCAGGTCCTCCCAACCGATTCCAACTGGAAGAACTTTAACAAAAAAAGTTGCTGGATGA 1359 0.429 MERYKLIKEVGDGTFGSVWRAINKQSGEVVAIKKMKKKYYSWEECVNLSEVKSLRKMNHSNIVKLKEVIRECDILYLVFEYMECNLYQLMKKREKLFSEDEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKNIIKVSDFGLVREISSQPPYTEYVSTRWYRAPEVLLQSFLYSSKVDMWAMGAIMAELFTLRPLFPGTSEADEIYKICSVIGSPTAESWADGLKLAKDINYQFPQLATTDLSVLIPSRSDDAINLIKSLCSWDPCKRPAAAEVLQHPFFKSCFYIPPSLRTRAVTRTPPSAGIRGSVDRQGVRKYSGALPNSKIGNNFSSMKLHPSVAPGVQRKLDMANEDGIKNKKSMKTTTPQSKYQPPGKGSPSSLNKGRTARSVSETADKLANMSISTRRHSLSQARPPPMKAGVNWSSESGNILLRSSQPIPTGRTLTKKVAG* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2569 452 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Psa4g2569 452 MobiDBLite consensus disorder prediction 356 422 - -
Psa4g2569 452 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2569 452 CDD STKc_MAK_like 4 283 - -
Psa4g2569 452 Gene3D Transferase(Phosphotransferase) domain 1 84 289 - -
Psa4g2569 452 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Psa4g2569 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Psa4g2569 452 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 401 - -
Psa4g2569 452 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2569 452 MobiDBLite consensus disorder prediction 362 412 - -
Psa4g2569 452 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 401 - -
Psa4g2569 452 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2569 452 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2569 Psa-Chr4 205933211 205940796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2569 1 290 Core Cell Cycle Gene Families AT3G48750 37.919 1.75e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Psa4g2569 Pkinase 2.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2569 K08829 - gmx:100784474 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2569 4 205933211 205940796 Psa4g2569 4 205933211 205940796 ECH