Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2560 ATGAGTTTCAGTGATTTTGTAGTTATACATGGTAATTGGTTACGGGTAACTGAGGTGTTTCTTCTGTGTCTTTTAAGTGGTTGTAGCATTTGCTGGTTCAACACTGTATGTTTTGTTCTCTGCATTAGAAATTTCCCAGTTCACCGAACACTTGCCTTATCACTTACTGTGAGTTTCAATGGTGTTAGCGCAGCCCTTTACACCCTTGCTGCCAATTCCATAGACCCGTCATCTCATGAACTGTATCTTCTTTTGAATTCCCTTGTTCCCCTTATTGTTTGCATTGCAGCACTTATTCCAATTCTTCGCCAACCGCCTGTAGATTCTCTAACACCTGACACAGTTAACCGTGACTCGCTAGTTTTTCTAATCTTGAACTTCCTAGCCATTTTCACTGGCCTTTATCTCCTCTTGTTTGCCTCAACTGCTTCTTCCATGACTTCAGCTCGGCTACACTTTGGTGTAACTATTCTTCTCCTCATCCTCCCGATGTTCATTCCTGGCATTGTATATGCCCGGGCTTGGGCTCGACGTACCATCCATTCCAGCTTTAAGATAGAAGGATCCAGCTTCCTTCTTGTTCATGATGAAGATCTTGAGCTGCATAAAGAACTACTTAGCCGTCACAATAGTTTTGCGGGCAATGGAGATTCTTATAGCCTGCTAAGTAACAATGGATCCATGTATTCAAATCCGAAGGAAGGCAATAGTGATGTTCGTTGTGAGAGGATTATTGGTCAGGATCACTTGACAATGCTAGGAGAAGAGCACTCGGCTGCGGTGCTTCTCCGAAGGTCAGACTTTTGGCTATACTACATTACATACTTCTGTGGAGGTACAATTGGTCTTGTCTATAGCAATAATCTGGGACAGATTGCTCAATCTCTAGGTCTGAGTTCAAGTACTTCCACCATTGTTACTCTCTACTCATCCTTTTCGTTTTTCGGCCGCTTGCTTTCAGCCGGACCAGACTATATTCGTAGTAAGTTCTACTTTGCAAGAACTGGCTGGCTCTCAATTGCACTTATACCAACACCGATTGCGTTCTTCTTGCTCGCTGCATCAGACAGTTCTCTGACTCTGTATACAGGAACTGCACTAATAGGAATGAGTTCTGGTTTCATATTTGCAGCTGCAGTTTCAGTTACATCCGAGCTGTTTGGACCCAACAGTGTCGGTGTCAATCACAACATTGTCATAACAAATATCCCCATCGGTTCGCTTCTCTACGGTTTTCTCGCTGCACTAGTTTATGATACCAATGCACGCTCAACGCCGGGAAACATGACAACGTCTGACTCAGTAGTTTGCATGGGAAGGCAATGCTACTTCTGGACATTTGTCTGGTGGGGGTGCACATCTGTTCTAGGACTATGTTCTAGTGTGCTGTTATTCCTAAGAACCAAACATGCATATGAACATTTTGAGGAACACCGGACTTCAACACATGCTATTGTGTCTTAA 1464 0.4358 MSFSDFVVIHGNWLRVTEVFLLCLLSGCSICWFNTVCFVLCIRNFPVHRTLALSLTVSFNGVSAALYTLAANSIDPSSHELYLLLNSLVPLIVCIAALIPILRQPPVDSLTPDTVNRDSLVFLILNFLAIFTGLYLLLFASTASSMTSARLHFGVTILLLILPMFIPGIVYARAWARRTIHSSFKIEGSSFLLVHDEDLELHKELLSRHNSFAGNGDSYSLLSNNGSMYSNPKEGNSDVRCERIIGQDHLTMLGEEHSAAVLLRRSDFWLYYITYFCGGTIGLVYSNNLGQIAQSLGLSSSTSTIVTLYSSFSFFGRLLSAGPDYIRSKFYFARTGWLSIALIPTPIAFFLLAASDSSLTLYTGTALIGMSSGFIFAAAVSVTSELFGPNSVGVNHNIVITNIPIGSLLYGFLAALVYDTNARSTPGNMTTSDSVVCMGRQCYFWTFVWWGCTSVLGLCSSVLLFLRTKHAYEHFEEHRTSTHAIVS* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2560 487 PANTHER NODULIN-LIKE/MFS TRANSPORTER 8 487 - -
Psa4g2560 487 Gene3D MFS general substrate transporter like domains 263 479 IPR036259 -
Psa4g2560 487 Pfam Nodulin-like 13 167 IPR010658 -
Psa4g2560 487 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 487 - -
Psa4g2560 487 SUPERFAMILY MFS general substrate transporter 254 470 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2560 Psa-Chr4 205409626 205416310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2560 12 481 Nodulin-like Gene Family AT1G31470 55.280 7.64e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2560 - - cam:101496594 816.994