Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2533 ATGTTCTATTTTATTTTTCTTAACCATTGCTTATATCATCGAGTCACACTAATTATTTTTTTCACTATAATATTATATAAGACACACCACCTTGAACACACTTTCATTCATACTCTTCCACTCCCACCACTTCATCTTCCACTTTCTTTTGGTTCAATGGAGAGTTCAAGAATCATGCAATGCTTTAACATTCTACTAATTGCACTTCTATTGTTACTAAAGACACAAGGACAGTTTGTTCCACTGACTCGGCTCGAAAGCGCGGTATCAAAAGGAGCCGTGTGTTTGGATGGAAGCCCCCCAGCTTATCATTTTCATGAAGGACATGAAGAAGGAGTGAACAACTGGATTGTTCATATTGAGGGAGGTGGATGGTGCCACAATGTCACCTATTGTCTTTACCGAAAGGACAGTCGGTTAGGTTCGTCAAAGGAAATGGAAGAGCAAACTTATTTTTCTGGATATTTAAGTAACAACCAACAATATAATCCTGATTTCTACAATTGGAATAGAGTCAAAGTTAGGTACTGTGATGGATCATCGTTTACCGGTGATGTTGAAGAAGTTGATCCAGAGACAAATTTGTACTTCAGAGGATCGAGGATTTTTTCTGCTGTAATGGAAGATTTACTAGCAAAAGGAATGGCTCATGCTGAAAAAGCTATTCTTTCTGGTTGTTCTGCTGGAGGATTAACTGCTATATTACACTGTGATGGATTTAAATCAATGTTACCTAATGGAGTTAAAGTGAAATGTGTCTCAGATGCTGGTTATTTTGTTAATGTAAAAGATATCTCTGGAGATTATTACATCGAAGATTACTTCGGTCAAGTTGTTGAAACCCATGGTTCGGAAAAGAATTTGCCTCAATCTTGCACTTCAAGACTCACTCCGGGACTATGTTTTTTCCCACAATATGTGGCATCAGATATTAGTACGCCAATCTTCATTGTAAATGCGGCATATGACTCATGGCAGATTAAGAACATTTTGGCGCCCGGTGCTGCTGATCCGAATGGCCAATGGGGTAGCTGCAAGACTAATCTAAAGAACTGCTCACCTGAACAACTAAATATAATGCAAGACTATAGGTCACAATTCTTAAAGGCGTTGAGTCCTATAACCAACTCTCCATCTAATGGAGTGTTCATAGACTCTTGTTATGTCCACTGCCAAACAGAACCACAGGAAACATGGTTTACAAATGACTCTCCAATGGTTGACAATAAAACAGTTGCAATGGCAGTAGGAGACTGGTTTTATGAAAGAAGTCCTTCACGTGAGATAGATTGCACTTACCCTTGCAACCCTACTTGTCAAAACCGTGTTTTTGATTTACAAGGATACCCAGGAATACACTAG 1362 0.3884 MFYFIFLNHCLYHRVTLIIFFTIILYKTHHLEHTFIHTLPLPPLHLPLSFGSMESSRIMQCFNILLIALLLLLKTQGQFVPLTRLESAVSKGAVCLDGSPPAYHFHEGHEEGVNNWIVHIEGGGWCHNVTYCLYRKDSRLGSSKEMEEQTYFSGYLSNNQQYNPDFYNWNRVKVRYCDGSSFTGDVEEVDPETNLYFRGSRIFSAVMEDLLAKGMAHAEKAILSGCSAGGLTAILHCDGFKSMLPNGVKVKCVSDAGYFVNVKDISGDYYIEDYFGQVVETHGSEKNLPQSCTSRLTPGLCFFPQYVASDISTPIFIVNAAYDSWQIKNILAPGAADPNGQWGSCKTNLKNCSPEQLNIMQDYRSQFLKALSPITNSPSNGVFIDSCYVHCQTEPQETWFTNDSPMVDNKTVAMAVGDWFYERSPSREIDCTYPCNPTCQNRVFDLQGYPGIH* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2533 453 PANTHER PECTIN ACETYLESTERASE 56 447 - -
Psa4g2533 453 Pfam Pectinacetylesterase 74 424 IPR004963 GO:0016787
Psa4g2533 453 PANTHER NOTUM-RELATED 56 447 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2533 Psa-Chr4 203847578 203851016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2533 64 452 Carbohydrate Esterase AT4G19420 56.840 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2533 K19882 - gmx:100780707 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2533 4 203847578 203851016 Psa4g2533 4 203847578 203851016 ECH