Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2503 ATGTCTCATATTGAGATGATTGATCTTACAAACTCTTCTGATTCAACAATAACACCTTCCCAGATCACTACTTTGCCCCAACTTGGTATGCACAGTGGTAGCTCGGTTGCGAGGGTTCTACCACCGTTACCTAAACCAAACACCTTCTCATTCTTCAATGGATCTAGGCTCAGGGTTCCATGGTCACAACAAGAACATGATTTATTTGTGATGGGGCTTACTGAATATGGAAAAGGGAAATGGAGCAAAATAGCAAAGCACTATGTATGCAATAAGACACCACAACAAGTTCAATGTTATGCTCGTAACTTTTTCAAATATCTACCAGCTTCATATGTGGATCGATTTAAGAGAAAGAAACTATCTTCAAATACCAACAACTTTGTTTCTAGAAAAAACAAAGAAACTCTCGATCTTTTTCCTATGAAAGATTATAGAGAAGAACCTAGTATTTTCATGAATGTGCCTAGGGTTTCTGCTAGTAATGGAGAAGTTGATTTGGAACTTCGCTTAAGTTTATATAAGTGA 528 0.3712 MSHIEMIDLTNSSDSTITPSQITTLPQLGMHSGSSVARVLPPLPKPNTFSFFNGSRLRVPWSQQEHDLFVMGLTEYGKGKWSKIAKHYVCNKTPQQVQCYARNFFKYLPASYVDRFKRKKLSSNTNNFVSRKNKETLDLFPMKDYREEPSIFMNVPRVSASNGEVDLELRLSLYK* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2503 175 CDD SANT 60 105 IPR001005 -
Psa4g2503 175 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 27 134 - -
Psa4g2503 175 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 27 134 - -
Psa4g2503 175 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 109 IPR017930 -
Psa4g2503 175 ProSiteProfiles SANT domain profile. 56 109 IPR017884 -
Psa4g2503 175 ProSiteProfiles Myb-like domain profile. 53 105 IPR001005 -
Psa4g2503 175 SUPERFAMILY Homeodomain-like 53 106 IPR009057 -
Psa4g2503 175 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 58 105 IPR006447 GO:0003677
Psa4g2503 175 SMART sant 57 107 IPR001005 -
Psa4g2503 175 Pfam Myb-like DNA-binding domain 58 103 IPR001005 -
Psa4g2503 175 Gene3D - 59 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2503 Psa-Chr4 201686145 201687495 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa4g2503 Myb_DNA-binding 7.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2503 - - mtr:MTR_8g072990 158.688