Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2501 ATGGAACTTTATACTCATACAGAACCACCACCACCATCACCTCCACCAGATTCTGCCACCGTCACCATCAACGGCGAAGCCACATTGGATGAAAACCTAGAACCACCACCACCGTCACCACCACCATCATCTTCATTATCACCACCACCACCTACGCCAGAACTTCAAGTCCCAATACGTTGGCCAGAAAATGGAATTCTAACAATAGAATGGATCCAAAACCTAATACTCTGCTTCGATTGGTCTTCCAAAAATCTACCACCTTCCGAATTCCCTTCCGTTCTTCCCGTTCAAGTCTTCGATTCCCTCATCCTCATCGCCTCCAAGATGCTTCACAAGGAACCTAATTGCATCCCTATACAACCCTTCCGTCCCGAACCTGATTCTTCTGCATCCGTTGTCGTTGTTGGAGACGTTCATGGCCAATTGCATGATGTTCTTTTCCTTTTCCGAGAGGCTGGGTACCCTTCTCGGGATCGAATCTTTGTATTCAATGGTGATTATGTTGATCGTGGAGCTTGGGGACTCGAAACTTTCTTGCTCTTGTTGGCTTGGAAGGTATTCATGCCGGAGAACGTATATTTATTAAGAGGGAATCACGAATCAAAATATTGCACGTCTGTCTATGGTTTTGAGAAAGAAGTTATGGTAAAGTATGGTGACAGTGGTAAACATGTATACAGAAAATGTTTAGGATGCTTTGAAGGTCTTCCTTTGGCTTCTATTATAGCAGGGTGTGTGTACACGGCTCATGGAGGACTTTTCCGTAGTGTAACTGTGACGCCTGCTAAGCGATTCAAAGGAAAGAAGAATCGTAGGATTAATGTTAATACTGACAGCAAAAAGCTATCGCTTGGTTCTTTGGAAGAGTTGTCAAGGGCTCGACGTTCTGTCCTTGATCCCCCTTGGGAAGGACAAAACTTGATTCCTGGTGATGTTTTGTGGTCTGACCCTTCTCACACCAACGGCCTTTCTCCAAACAAAGAAAGAGGCATTGGTTTGGTGTGGGGCCCTGATTGTACTGAACAATTTTTGAAGAAGTACCAGCTGAAGTTAATCATCAGGTCACATGAAGGCCCTGATGCTAGGGAGAAGAGGGATGGTTTTGAGGGAATGGCTGAAGGATACACTATTGATCATGTTGTAGATTCTGGAAAACTGGTCACTGTTTTTAGTGCTCCAGATTACCCGCAGTTTCAGGCAACGCAGGAGAGGTATAACAACAAAGGTGCTTATGTTGTCCTTGAGCCCCCAAATTTTGACACTCCGATATTTCATGGATTTTCGGCTGTAACTCCACGACCAAAGGCGAATCCCTATTATGATTATGAAGAAGTGATTGACTCGGACGGAGAATTGGACTTGGCCTCCATGGTAACTTCATGA 1386 0.4481 MELYTHTEPPPPSPPPDSATVTINGEATLDENLEPPPPSPPPSSSLSPPPPTPELQVPIRWPENGILTIEWIQNLILCFDWSSKNLPPSEFPSVLPVQVFDSLILIASKMLHKEPNCIPIQPFRPEPDSSASVVVVGDVHGQLHDVLFLFREAGYPSRDRIFVFNGDYVDRGAWGLETFLLLLAWKVFMPENVYLLRGNHESKYCTSVYGFEKEVMVKYGDSGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVTVTPAKRFKGKKNRRINVNTDSKKLSLGSLEELSRARRSVLDPPWEGQNLIPGDVLWSDPSHTNGLSPNKERGIGLVWGPDCTEQFLKKYQLKLIIRSHEGPDAREKRDGFEGMAEGYTIDHVVDSGKLVTVFSAPDYPQFQATQERYNNKGAYVVLEPPNFDTPIFHGFSAVTPRPKANPYYDYEEVIDSDGELDLASMVTS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2501 461 SUPERFAMILY Metallo-dependent phosphatases 50 436 IPR029052 -
Psa4g2501 461 CDD MPP_PP7 61 442 IPR041754 -
Psa4g2501 461 ProSitePatterns Serine/threonine specific protein phosphatases signature. 196 201 IPR006186 GO:0016787
Psa4g2501 461 Gene3D - 90 448 IPR029052 -
Psa4g2501 461 PRINTS Serine/threonine phosphatase family signature 132 159 IPR006186 GO:0016787
Psa4g2501 461 PRINTS Serine/threonine phosphatase family signature 162 189 IPR006186 GO:0016787
Psa4g2501 461 PRINTS Serine/threonine phosphatase family signature 195 219 IPR006186 GO:0016787
Psa4g2501 461 PRINTS Serine/threonine phosphatase family signature 232 258 IPR006186 GO:0016787
Psa4g2501 461 PRINTS Serine/threonine phosphatase family signature 292 319 IPR006186 GO:0016787
Psa4g2501 461 PRINTS Serine/threonine phosphatase family signature 386 402 IPR006186 GO:0016787
Psa4g2501 461 MobiDBLite consensus disorder prediction 33 53 - -
Psa4g2501 461 MobiDBLite consensus disorder prediction 1 53 - -
Psa4g2501 461 Pfam Calcineurin-like phosphoesterase 132 360 IPR004843 GO:0016787
Psa4g2501 461 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 52 458 - -
Psa4g2501 461 SMART pp2a_7 95 435 IPR006186 GO:0016787
Psa4g2501 461 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 52 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2501 Psa-Chr4 201307814 201311908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2501 58 352 Calmodulin-binding Proteins AT5G63870 69.595 8.59e-153 434