Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2498 ATGGGAGGTGCAGGGAGTGGTGAGATATGGAAAGCACACACCGCCATGGCGATTGTGCAGTTATTCACCGGAGGTTATCACGTTATCACTAAATTGGCTCTTAATGTTGGAGTCAATCAAATCGTTTTTTGTGTTTTTCGTGATCTCCTTGCTCTCTCTATTCTCGCTCCCATCGCTTATTTCCGTGAAAGACGTACACGGCCACCCCTAACAAAGCGCTTCGTGACATCATTCTTCTTTCTTGGATTAACTGGGATATTTGGAAATCATCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCTGCTGCAATTCAGCCAGCGACTCCAGTCTTTACATTTGTGTTGGCTATAATGATGGGTACAGAAAGAGTAAACTTGCTAAGATATGAAGGTCTGGCCAAGGTTGGAGGAATTTTTGTCTGTGTTTTGGGGGCCTTAGTGATGGTTTTGTACCGTGGTCCAGCACTGGTAGGATCTTCAGAATTGGACCTTATATCACACAGTGAAATAAGTGCCAGAGGTCAACCAGAGCCTTCTGGATGGTTAGTTAGTGGTTTAATGGATCTTGGACTTGATCATTTTCATCTTGGAGTTTTGTGCTTCATAGGGAACTGCATGTGCATGGCTACTTTTCTATCCATTCAGGCTCCATTATTAAAAAAGTATCCTGCAAACCTATCTGTCACAGCATATTCGTACTTCTTTGGAGCTTTACTGATGGTAACTACATCATATTTCGTAACCGATGAGTCAACTGACTGGAGTTTGAATCAGTCTGAAACATTTGCCGTTTTATATGCTGGAATTATTGCATCTGCACTTAATTATGGAATCATTACATGGAGCAACAAAATCTTGGGCCCAGCCATGGTTGCCCTTTATAATCCACTTCAACCTGGGGCAGCTGCTCTCTTATCTAGAATTTTTATTGGAAGTCCAATTTACATGGGAAGCGTGTTAGGTGGATCGCTAATCATTACTGGTCTGTATGCGGTTACTTGGGCATCATATAGAGAAAGACAGGCAGCTGCAGGAGTTATTCCTCATCATGCTTCTAATTGGGTCTCGGAATCACGTAACAAGTCACCGTTTCATAGAGTTAACATTTTCTCAGGCTCCTCTGGTTTATTATCTCCAAAGCCTTCGGATTGA 1164 0.4192 MGGAGSGEIWKAHTAMAIVQLFTGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPIAYFRERRTRPPLTKRFVTSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFVLAIMMGTERVNLLRYEGLAKVGGIFVCVLGALVMVLYRGPALVGSSELDLISHSEISARGQPEPSGWLVSGLMDLGLDHFHLGVLCFIGNCMCMATFLSIQAPLLKKYPANLSVTAYSYFFGALLMVTTSYFVTDESTDWSLNQSETFAVLYAGIIASALNYGIITWSNKILGPAMVALYNPLQPGAAALLSRIFIGSPIYMGSVLGGSLIITGLYAVTWASYRERQAAAGVIPHHASNWVSESRNKSPFHRVNIFSGSSGLLSPKPSD* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2498 387 PANTHER WAT1-RELATED PROTEIN 11 357 IPR030184 GO:0016021|GO:0022857
Psa4g2498 387 PANTHER WAT1-RELATED PROTEIN 11 357 - -
Psa4g2498 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Psa4g2498 387 Pfam EamA-like transporter family 15 152 IPR000620 GO:0016020|GO:0016021
Psa4g2498 387 Pfam EamA-like transporter family 200 337 IPR000620 GO:0016020|GO:0016021
Psa4g2498 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2498 Psa-Chr4 201088599 201094662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2498 8 271 Nodulin-like Gene Family AT3G45870 68.182 1.83e-123 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2498 - - gmx:100781969 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2498 4 201088599 201094662 Psa4g2498 4 201088599 201094662 ECH