Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2492 ATGATCATTGATATGCCACCGTCCATGGCTCAAAGTTCCCGGTCAAGCAGATCTTCCTTTAGTTCTAGCAACGGCAATGAGAATACTCTTGTGAACAACTACACTGCTGTTAACATTGCTGATGATTCTGATACTGATAGCTCAAATTTAGCACCATCAACTCCATCAACTCTGTCAATGGCTGTTCCAGCAGAACTCGCTGGAGCTATACCCTTGATTGACAAATTTCAGGTGGATGGATTTTTAAAACTGATGCATAAACAAATTCAATCTGCTGGGAAACGTGGATTTTTTTCTAAAAGATCTTCAGATCCCCAAGCTCGTGAGAAATTTACATTTGAGGACATGCTGTCTTTTCAAAAGGATCCAATACCAACGGCATTGCTTAAGATTAATGGTGATTTAGTAAGTCGTGCGACAAAATTATTCCAGATAATTTTGAAGTATACTGGAGTTGTTGATTCATCTGATAATGCAACTCCATTAAGCTTGGATGAACAAGTTGAGCTTGTTGAGAAACTATACAAGCAAAGTTTGAAACGATCAGAACTCCGAGATGAGCTTTTTATTCAGATATCAAAACAAACAAGAAATAACCCTGATAGGCAATACTTGATCAAGTCATGGGAGCTTATGTACGTATGCGCATCCTCCATGTCGCCTAGTAAAGATATTGCAGTTTATCTGTCAGAATACGTTCATAACATAGCACATGGTGTAGCTACTGATTCCGAGATTCAAACCCTGGCATTAAATTCGTTGAATGCTTTGAAGCGTTCTGTTAAGGCTGGTTCTAGACATATAATTCCTGGGCGAGAAGAGATTGAAGCTTTGTTGACTGGGATAAAACTCACAAATGTAGTGTTCTTCTTAGATGAAACATTTGAAGAAATTACGTATGACATGTCAACAACAGTTGCCGACGCTGTTGAGGAACTCGCAGGGCTCATTAAACTGTCTACATACTCTAGCTTTAGTCTGTTTGAATGTCGTAAAGTTGTTACAACTTCCAAATCACCTGATCCTGGGAATGAGGAGTACATTGGATTAGATGATAACAAATATATTGGGGATCTACTGGCACAATTTAAAGCAGCAAAAGATCGAAATAAGGGAGATATCTTGCACTGTAAACTGATATTCAAGAAAAGGCTATTTCGTGAGTCCGATGAAGCTGTGACAGATCCAATGTTTGTGCAGTTGTCCTATGTACAATTGCAGCATGATTATATTTTGGGTAATTATCCTGTTGGAAAGGATGATGCCGCTCAGCTTTCTGCATTACAAATCTTGGCTGAGATTGGATCTGTTACCACACCTGAATCATGCACTAACTGGAATTCACTTTTGGAGCGATTTCTTCCTAGACAAATTTCAATGACTCGAGCAAGACGTGAATGGGAGTTTGATATTCTCTCTCGATATCATTCATTGGAGCATCTGACAAAAGATGATGCAAGACAACAATTTCTGCGTATATTGAGAGCCCTTCCTTATGGAAATTCTGTTTTCTTCAATGTTCGCAAGATTGATGATCCTATTGGACTCTTGCCTGGACGGATAATAATTGGAATTAATAAAAGAGGGATTCATTTTTTTCGTCCAGTTCCTAAGGAATATTTGCACTCAGCTGAGTTGAGAGACATAATGCAATTTGGTAGCAGCAATACCGCAGTCTTTTTCAAAATGCGAGTAGCCGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGGGAAGAAATTTGCGTAGCCCTTCAGACACATATAAATGATGTAATGTTGCGCCGCTATTCGAAAACACGATCTTCTAGTGGCGGTAGTTCTTTAAATGGAGATGTTTCTAATAATTCAAAGCCTCCTAGTTCAGAGTCATATGAGAAGCGCATTCAAGATTTATCTAAACTTGCTGAAGAATCTCAAAGAAATGTTGATCAATTGCATAAAGAATTGCGTGAGAAGGAAGAACAGGAAGAAAAATGGCAAGAACAAGTAGATGGTTTGAAGGAATCCTTAAAAGCTAATAAGCAAAATCTTGAGGCAGTTACAAGTGACTGTGAAAGGCTTAGGTTATTATGTAGTAGGAAAGATCAGGCGTTGCAGGTTATAGAGAACGATTCCAAAAAGGATCTTGTTGAAACAAATAACCAAGTGCTACAAAAGCTTAAATATGAGCTAAAACATTGTAAAGATGAGTTGCATTCAGCTGAAGAAACTATTGAAACCTTGACAAGTGAAAAAAAGATTTTAGAACAGAGACTATATGTGCTTGAGAAGAGGAATGCTGAAGAGAGTAATTCTCTTCAACGGAAACTTGAGCAAGAACGCAAAGCTGTGAAGTCTGAAGTGTATGACCTTGAAAGAAAGCTAGAAGGGTATAGACAAGAACTAATGGCGGCTAAGTCTGTTATTTCAGTCAAGGACTCTGAGTTGACCGCACTGCAGAATAATCTCAAGGAACTTGAAGAATTACGAGAAATGAAAGAGGATATTGATAGAAAGAATGAACAAACAGCTGCCATATTGAAGATGCAGGGGGCTCAACTAGCTGAGATGGAAACTCTTTACAAGGAAGAACAAGTTTTAAGAAAGCGTTATTTTAATGTTATAGAAGATATGAAAGGCAAGATCAGAGTTTATTGCCGGCTAAGACCTCTTAGTGAAAAAGAGGTTGCTGAAGAAGAAAGAGAAGCTGTTACTGCAATAGATGAGTTTACTGTTGAGTTTCTTTGGAAAGACGATAAGCCAAAGCAGTACATGTATGATCGTGTTTTTGGTGGTGATGCAACTCAAGAAACCGTATTTGAGGATACAAGGTATTTGGTGCAATCTGCTGTAGATGGTTTTAATGTGTGCATATTTGCTTACGGACAAACTGGCTCTGGAAAGACATTTACAATCTATGGATCGGAAGACAACCCCGGGCTTACACCTCGTGCAATTGCCGAACTTTTTAGAATTTTAAGGAGAGATGGTAACAAGTATTCATTTTCGTTGAAGGCATACATGGTGGAATTATATCAAGATACACTTTTAGATCTTCTCTTACCTAAGAATGCAAAGCATTCAAGACTGGATATCAAGAAGGATTCGACGGGCATGGTTGTTGTGGAAAACGTGACAGTTGTGTCAATTTCTACAACTGAAGAATTGAATAATATAATACATAAGGGATCCGAACGACGACATATATCAGGAACACAAATGAATGCAGAAAGTTCGAGGTCTCATCTCATTCTTTCAATAGTAATTGAAAGTACAAACCTTCAAAGTCAATCTGTTGCAAGGGGAAAGCTGAGTTTTGTTGATCTCGCTGGTTCAGAAAGAGTGAAAAAGTCAGGTTCTATGGGTAGTCAACTGAAGGAAGCACAAAGTATCAACAAATCATTATCAGCACTAGGAGATGTGATAAGTGCTCTGTCTTCTGGTGGTCAACACACACCTTACAGGAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGTGGTAATGCAAAAACTCTCATGTTTGTCAATGTTTCTCCAATAGAATCAAGCTTAGATGAGACTCATAACTCTCTCATGTACGCGTCGCGGGTGAGAGCAATTGTGAATGATCCTAGCAAAAATGTGAGTTCAAAAGAAATAGCGCGATTAAAGAAGTTGGTTGCGTATTGGAAACAACAAGCCGGTAGAGCGGCTGAAAATGAAGATTTAGAAGAAATTCAAGAAGAAAGATTACCTAAAGAGAGACCAGATAGTCACGGTAGCTCTAGATCTAGTCTAGGTTAA 3774 0.3853 MIIDMPPSMAQSSRSSRSSFSSSNGNENTLVNNYTAVNIADDSDTDSSNLAPSTPSTLSMAVPAELAGAIPLIDKFQVDGFLKLMHKQIQSAGKRGFFSKRSSDPQAREKFTFEDMLSFQKDPIPTALLKINGDLVSRATKLFQIILKYTGVVDSSDNATPLSLDEQVELVEKLYKQSLKRSELRDELFIQISKQTRNNPDRQYLIKSWELMYVCASSMSPSKDIAVYLSEYVHNIAHGVATDSEIQTLALNSLNALKRSVKAGSRHIIPGREEIEALLTGIKLTNVVFFLDETFEEITYDMSTTVADAVEELAGLIKLSTYSSFSLFECRKVVTTSKSPDPGNEEYIGLDDNKYIGDLLAQFKAAKDRNKGDILHCKLIFKKRLFRESDEAVTDPMFVQLSYVQLQHDYILGNYPVGKDDAAQLSALQILAEIGSVTTPESCTNWNSLLERFLPRQISMTRARREWEFDILSRYHSLEHLTKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIIIGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKTRSSSGGSSLNGDVSNNSKPPSSESYEKRIQDLSKLAEESQRNVDQLHKELREKEEQEEKWQEQVDGLKESLKANKQNLEAVTSDCERLRLLCSRKDQALQVIENDSKKDLVETNNQVLQKLKYELKHCKDELHSAEETIETLTSEKKILEQRLYVLEKRNAEESNSLQRKLEQERKAVKSEVYDLERKLEGYRQELMAAKSVISVKDSELTALQNNLKELEELREMKEDIDRKNEQTAAILKMQGAQLAEMETLYKEEQVLRKRYFNVIEDMKGKIRVYCRLRPLSEKEVAEEEREAVTAIDEFTVEFLWKDDKPKQYMYDRVFGGDATQETVFEDTRYLVQSAVDGFNVCIFAYGQTGSGKTFTIYGSEDNPGLTPRAIAELFRILRRDGNKYSFSLKAYMVELYQDTLLDLLLPKNAKHSRLDIKKDSTGMVVVENVTVVSISTTEELNNIIHKGSERRHISGTQMNAESSRSHLILSIVIESTNLQSQSVARGKLSFVDLAGSERVKKSGSMGSQLKEAQSINKSLSALGDVISALSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPIESSLDETHNSLMYASRVRAIVNDPSKNVSSKEIARLKKLVAYWKQQAGRAAENEDLEEIQEERLPKERPDSHGSSRSSLG* 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2492 1257 ProSiteProfiles FERM domain profile. 284 598 IPR000299 GO:0005856
Psa4g2492 1257 Gene3D - 1200 1248 - -
Psa4g2492 1257 CDD KISc_C_terminal 874 1199 - -
Psa4g2492 1257 Pfam MyTH4 domain 172 277 IPR000857 GO:0005856
Psa4g2492 1257 Pfam Kinesin motor domain 882 1197 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2492 1257 ProSitePatterns Kinesin motor domain signature. 1097 1108 IPR019821 GO:0003777|GO:0005524|GO:0007018
Psa4g2492 1257 Gene3D - 283 387 - -
Psa4g2492 1257 SMART MyTH4_1 119 279 IPR000857 GO:0005856
Psa4g2492 1257 MobiDBLite consensus disorder prediction 602 624 - -
Psa4g2492 1257 Coils Coil 623 678 - -
Psa4g2492 1257 ProSiteProfiles Kinesin motor domain profile. 876 1197 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2492 1257 MobiDBLite consensus disorder prediction 8 25 - -
Psa4g2492 1257 Gene3D MyTH4 domain 97 280 IPR038185 -
Psa4g2492 1257 Coils Coil 762 841 - -
Psa4g2492 1257 MobiDBLite consensus disorder prediction 602 628 - -
Psa4g2492 1257 Gene3D - 396 497 IPR014352 -
Psa4g2492 1257 SUPERFAMILY PH domain-like 504 592 - -
Psa4g2492 1257 PANTHER KINESIN-RELATED 605 1249 IPR027640 GO:0003777|GO:0007018
Psa4g2492 1257 SMART B41_5 280 504 IPR019749 -
Psa4g2492 1257 PRINTS Kinesin heavy chain signature 948 969 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2492 1257 PRINTS Kinesin heavy chain signature 1067 1084 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2492 1257 PRINTS Kinesin heavy chain signature 1098 1116 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2492 1257 PRINTS Kinesin heavy chain signature 1147 1168 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2492 1257 MobiDBLite consensus disorder prediction 1 25 - -
Psa4g2492 1257 Coils Coil 719 760 - -
Psa4g2492 1257 CDD FERM_B-lobe 399 497 IPR019748 -
Psa4g2492 1257 CDD FERM_C_KCBP 501 602 - -
Psa4g2492 1257 ProSiteProfiles MyTH4 domain profile. 119 279 IPR000857 GO:0005856
Psa4g2492 1257 Pfam FERM central domain 390 504 IPR019748 -
Psa4g2492 1257 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 605 1249 - -
Psa4g2492 1257 SUPERFAMILY Second domain of FERM 382 499 IPR035963 -
Psa4g2492 1257 MobiDBLite consensus disorder prediction 1227 1250 - -
Psa4g2492 1257 SUPERFAMILY Prismane protein-like 819 880 IPR011254 GO:0003824|GO:0016491
Psa4g2492 1257 Gene3D - 502 610 IPR011993 -
Psa4g2492 1257 Gene3D Kinesin motor domain 818 1198 IPR036961 -
Psa4g2492 1257 SMART kinesin_4 874 1205 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2492 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 876 1225 IPR027417 -
Psa4g2492 1257 MobiDBLite consensus disorder prediction 1225 1257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2492 Psa-Chr4 200871134 200879569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2492 53 1248 Calmodulin-binding Proteins AT5G65930 71.569 0.0 1766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2492 4 200871134 200879569 Psa4g2492 4 200871134 200879569 ECH