Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2475 ATGACTTGGGACGAAATTGATGTCGTTGGAGTGTCTCCTTCCCCAAGGTCTGATCATGCTGCTGCTGTACATGTGGAGCGATACTTGCTCATCTTCGGAGGGGGTTCACATGCAACTTGCTACAATGATTTACATGTTCTCGATTTGCAAACTATGGAATGTCTGCTGCTGTACATGTGGAGCGATACTTGCTCATCTTCGGAGGGGGTTCACATGCAACTTGCTACAATGATTTACATGTTCTCGATTTGCAAACTATGGAATGGTCTCGCCCCACACAACAAGGTGAAATACAAACTCCACGTGCAGGATTCTGATATGAACAGGCAGGAGCTGGTCCATCTCAAGCAATTGGTCACAAATGTAGAGTTTGAGAAATCAAGAATTTCAGATCTTCTACATATGGTTCAAGCATCTTTAAACACAGCAGAATTAGATGCTCTAGTCATGAAACAGAAAAATTATGATCTTACTCAAGAAATTGTAAAGCTAGGTACTTTGTCTGGTGAACCTTGTACCGTTGTAAATACTGGTTTTTTAGCCACAGATATTGAAGTTGGGTATGAATCACGGTTTCGTGGATCTAAAGCATTATGCAATGGCTATTATGAGAAATTAGACAGTACCGGCTCTTACAGTTTGCTTCATGATGAAAGCAATGATCATCACATTGGAAGATTAATTAGTAAAACAGTTAATATTGGAAATGATGCTGTCACAATTGATAAGGGCGAAAGTAGTATAATCTCAAATATCCTGTCCATTGATTTTGATCCCTGGGATGACTCCATAACATCACCTTATAATATAGTGAAGTTGTTGAGTGATAATACTGATAGCCAACCCGCTAGCAATAGCCTAAGGGCCACACACTCAATCAGAGTCTGGCAGAAAGAGACTTTTATTGCAAATGGTTTTCCTACCAGTAACTTTAAGGAAGCTGAAAATATAAGCAATGCCCATTCAATAGCTTCTTCCAATAGGCTTTCTGCTATTTCAAGAGCACAAGTTTCAGCTCCGCCAGACAAAATTACACAACTTACTTTCTTGGACTTGTCTTATAACAATCTCAGTGGACCATTGCCCAAGTTTCCAGCCAGGTCATTTAATATTGTTGGAAACCCGTTAATTTGTATAAGCAAATCTATTGAAGGCTGCTCTGGAACAGTCACCCTTATGCCTGTTCCTGTCTCTCAAGTATCATCACAAGGAAAACACAAGCCCAAAAAACTAGCAATTGCTCTTGGGGTCAGCTTTAGTTGTGTTTTTCTCTTAATCGTGTGTTTGGAGCTCTTTTGGTATAGAGAGAAAAGACAGCATGGAGCCATCTTGTATATTGGTGATTATAAAGAGGAGGTTGTTGTTAGCTTAGGGAATCTTAAAAATCTTGGTTTCAAAGAGCTCCAACATGCAACAGATAGTTTCAGCTCCAAGAATATACTCGGTGCTGGAGGTTCTGGCAATGTTTATAGGAGGAAGCTTGGAGATGGTACAATGGTGGTGGTGAAAATACTGAAAGATGTAAATGGTAGTGCTGGCGAGTTACAGTTCCAAACAAAATTGGAAATGATCATCCTGGCAGTTCACCGTAATTTACTCCGCCTAATTGGATATTGTGCTACTCCTACCGAAAGACTTCTGGGTTACCCTTACCTGACTAACGGAAGTGTGGCCTCCAGGCTTAGAGGAAAACCAGTTTTAGATTGGAACACAAGAAAGAGGATAGCAATTGGAGCTGCAAGGGGCCTTCTATACCTTCATGAGCAATGTGATCCGAAAATAATACACAGAGATGTAAAGGCTGCCAACGTGCTTCTGGATGACGATTACGAGGCTATTGTTGGTGATTTTGGCCCTGCAAAGCTTCTCGATCATGCTGATTCCCATGTCACCACTGCAGTCCGTGGCACTGTTGGGCACATTGCGCCGGAGTATCTATCCACTGGCCAATCATCTGAGAAAACTGATGTGTTTGGATTCGACATTCTCTTGTTAGAGCTTATAACTGGAATGATAGCTCTCGAGTTCGGGAAAACCTTGAATCAAAAAATCCGTGCTTTACGCGATACCTCTCCACCTGCATTTGACGCTAGAAAATTATTGATCGAGAAAGCCAGGACAGTAATTAGGAAGAAACTCGAAGAAATGAAGTTGTCATCCGAAGCTGCAGCTCTAAAAGAGAAAGAAAAGGTGCAACTTGATGTTTGTCAAGTCAAAAGACAGACATGTAGGATAGCCAGGACAGTAATTAGGAAGAAACTCGAAGAAATGAAGTTGTCATCCGAAGCTGCAGCTCTAAAAGAGAAAGAAAAGGTGCAACTTGATGTTTGTCAAGTCAAAAGACAGACATGTAGGAAAGCATCTCTGAATGTTTCTGGCATTCCATTTGAACACGGAAGAGCCAATCCGATCTCAATAATTGTCCCGGATTCTGACTTTCACGACTTTGACAAAGATAGGACAGAGGAATGTTTCCAGCCAAAGCAAATATGCGCCTTCGTTGATAAAGAGGAGTTCCGTTTGGTCCAGATATGCGGGCTGAACATTATTATTCAGGTGGATGACTTGGAAGAGACAAGTGAATATTACCAAAACAGTTCGCTTCAACGAATTAATATCCCTCGTGGAGAATGGCCTAGGATTAGAATGGGCACATATGGGAATATTCACCGAGTTGGGAGTTATGATCACATGCAATTTAAAGGTGTTATCGCCAAAGTCGCTAATGTGGAGTTGGGTTACAAGGCTGTTCACTTCTATTTGCAAGAGCATCCTGATCTTATCAATGATGTTCTGAATGTCCTTGCACTTCGGGTTGACCATGCACGCGTTGTTGACATCATGCGAAAGGCCGGTCACCTCCTTCGGGTCAAACCATACATGGTTGCAGTTAAGAGCAATAACGTGTCTACTGTTAACCACTCTGCAAGTCATGGGTCTCATTCCAGTTGTAGTTGA 2958 0.4172 MTWDEIDVVGVSPSPRSDHAAAVHVERYLLIFGGGSHATCYNDLHVLDLQTMECLLLYMWSDTCSSSEGVHMQLATMIYMFSICKLWNGLAPHNKVKYKLHVQDSDMNRQELVHLKQLVTNVEFEKSRISDLLHMVQASLNTAELDALVMKQKNYDLTQEIVKLGTLSGEPCTVVNTGFLATDIEVGYESRFRGSKALCNGYYEKLDSTGSYSLLHDESNDHHIGRLISKTVNIGNDAVTIDKGESSIISNILSIDFDPWDDSITSPYNIVKLLSDNTDSQPASNSLRATHSIRVWQKETFIANGFPTSNFKEAENISNAHSIASSNRLSAISRAQVSAPPDKITQLTFLDLSYNNLSGPLPKFPARSFNIVGNPLICISKSIEGCSGTVTLMPVPVSQVSSQGKHKPKKLAIALGVSFSCVFLLIVCLELFWYREKRQHGAILYIGDYKEEVVVSLGNLKNLGFKELQHATDSFSSKNILGAGGSGNVYRRKLGDGTMVVVKILKDVNGSAGELQFQTKLEMIILAVHRNLLRLIGYCATPTERLLGYPYLTNGSVASRLRGKPVLDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDDYEAIVGDFGPAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFDILLLELITGMIALEFGKTLNQKIRALRDTSPPAFDARKLLIEKARTVIRKKLEEMKLSSEAAALKEKEKVQLDVCQVKRQTCRIARTVIRKKLEEMKLSSEAAALKEKEKVQLDVCQVKRQTCRKASLNVSGIPFEHGRANPISIIVPDSDFHDFDKDRTEECFQPKQICAFVDKEEFRLVQICGLNIIIQVDDLEETSEYYQNSSLQRINIPRGEWPRIRMGTYGNIHRVGSYDHMQFKGVIAKVANVELGYKAVHFYLQEHPDLINDVLNVLALRVDHARVVDIMRKAGHLLRVKPYMVAVKSNNVSTVNHSASHGSHSSCS* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2475 985 SUPERFAMILY Kelch motif 2 54 IPR015915 GO:0005515
Psa4g2475 985 Gene3D Transferase(Phosphotransferase) domain 1 552 773 - -
Psa4g2475 985 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 342 684 - -
Psa4g2475 985 Gene3D Phosphorylase Kinase; domain 1 446 551 - -
Psa4g2475 985 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 342 684 - -
Psa4g2475 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Psa4g2475 985 Gene3D - 1 84 IPR015915 GO:0005515
Psa4g2475 985 SMART serkin_6 475 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2475 985 Gene3D Tetratricopeptide repeat domain 889 978 IPR011990 GO:0005515
Psa4g2475 985 SUPERFAMILY ARM repeat 831 974 IPR016024 -
Psa4g2475 985 ProSiteProfiles Protein kinase domain profile. 475 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2475 985 SUPERFAMILY Protein kinase-like (PK-like) 459 699 IPR011009 -
Psa4g2475 985 Pfam Protein kinase domain 476 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2475 985 PIRSF CHC 76 159 IPR016341 GO:0016192|GO:0032051|GO:0071439
Psa4g2475 985 PIRSF CHC 818 870 IPR016341 GO:0016192|GO:0032051|GO:0071439
Psa4g2475 985 PIRSF CHC 889 977 IPR016341 GO:0016192|GO:0032051|GO:0071439
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2475 Psa-Chr4 199036822 199040873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2475 325 683 Receptor kinase-like Gene Family AT2G23950 67.131 2.13e-162 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Psa4g2475 Pkinase 5.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2475 - - gmx:100797186 569.696