Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2449 ATGTCTCATATTGAGATGATTGATCTTACAAACTCTCGTGATTCCTCTCCATCACCACACATATCTTCATCTAATGTACCAATGATCCTTAACATTGGTCATGTTTCTACCAATCCTAATCTTCACAACCATATACATCATCACCAACACCAAACTAATGCGTTGGTCTCACTACCACAAAGATTCAGGGTTCCACCACAATCTGAATTCAACAATAACACCTCCCAGATCACTACTATGCCCCAACTTGGTATACACAGTGGAAGCCCAGTTACGAGGGTTCTTCAACCGGTACCTGAACGAAATACCTTTCCATTCCCAAATGGATCTAGGCTCAGGGTCCCGTGGTCACAACAAGAGCATGATTTATTTGTGATGGGGTTGATTGAATATGGAAAGGGAAAATGGAGCAAAATAGCAAAGCACTATGTATGCAACAAGACACCACAACAGGTTCAATGCTATGCTCGTAGCTTTTTCAAGTATTTACCAGCTTCATATGTGCATCGTTTTAAGGGAAAGAAACTATCTTCAAACTCCAACAACTTTGTTTCTAGAAGAAACAAGGAAACTCTCGATCTTTTTCCAAAGAAAGATTATAGAGGAGAAACTAGCACTACCATGACTGTACCTAGGGCTGTTGTTGGTAATGGAGAAGTTGATGTGGAGCTTCGTTTGAGTTTATATAAGTGA 693 0.4012 MSHIEMIDLTNSRDSSPSPHISSSNVPMILNIGHVSTNPNLHNHIHHHQHQTNALVSLPQRFRVPPQSEFNNNTSQITTMPQLGIHSGSPVTRVLQPVPERNTFPFPNGSRLRVPWSQQEHDLFVMGLIEYGKGKWSKIAKHYVCNKTPQQVQCYARSFFKYLPASYVHRFKGKKLSSNSNNFVSRRNKETLDLFPKKDYRGETSTTMTVPRAVVGNGEVDVELRLSLYK* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2449 230 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 15 188 - -
Psa4g2449 230 SMART sant 112 162 IPR001005 -
Psa4g2449 230 ProSiteProfiles Myb-like domain profile. 108 160 IPR001005 -
Psa4g2449 230 SUPERFAMILY Homeodomain-like 108 161 IPR009057 -
Psa4g2449 230 Gene3D - 114 164 - -
Psa4g2449 230 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 15 188 - -
Psa4g2449 230 MobiDBLite consensus disorder prediction 1 22 - -
Psa4g2449 230 CDD SANT 115 160 IPR001005 -
Psa4g2449 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 164 IPR017930 -
Psa4g2449 230 Pfam Myb-like DNA-binding domain 113 155 IPR001005 -
Psa4g2449 230 ProSiteProfiles SANT domain profile. 111 164 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2449 Psa-Chr4 195934236 195935847 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa4g2449 Myb_DNA-binding 3.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2449 - - mtr:MTR_8g072990 191.815