Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2443 ATGGACACTCAGGAGAATGATCCCATGAGGGTGATATGGTCATTCTCCACCGGATCGCCGATCTTTAGTTCGTATCAAGCTCCTGTCAATAAGGAACGTGGTAAAGAAAATAATGCATCTGCGGTGCCGGTGCCGGTTAGCGGGTTGGTCGAGTGCGGCGATGATTGGTCTTTGTACATGCATGACAAGCACTTTGGTAAAATGAGAATCTCAGAGTCTATTGCAGAATTTGTACTTCGGACACCTACAATTTCGGATGATGGAGCTGTCATACTTGGATCCAAAGAAATCAGTTTATTTGAAGTAGATGCTAAAACTGGATCGATCATTCAAATCCACGCCAACTCTGACCCTGATAATGTTTTTGCACCTTTGAGTCATGCTAGGCAGGGCGTTAGAAATATCATGAGTGCGGATCCTAAGAAGCTAAATTCATCGCAGACGCTGCTCAAGATTTTTAGGACAGATTATTCTCTGCGGTCTGTTAGCCCCAACTCTAGAAGAGTATTGTGGAATTTGACAGTAGCTGAATTCGAGGCTGTATTATTATGCCAACATACTACATTTGATGTAGAGGATGGATATCTTTCTGAAAGTGGACTCAATTTTGCGATGCCTTACCCATGTCAAGAGATGCAAAATGTCTTCCGCGTGAAAAAAAGGTTTCTTTTAGAATCTTTAATCACTGAAAGTTTACACGGGGCTTTTCCTGAAAGTGATATACTCTCAGTGGCCGCCTCAGATCTGATGATTCCATTGCAACCTAGTATTGATGGACACCCTCAGCCTCTCATTGAGATTACTTCACCGGGTGATGTTTATTTCTACAAGAAGAGTGGATGGTCAACTCCATTACCTAGTATGTTGTTTATGGTTTTTCTTTTGGTGTTGGGTTTTTCACTCATCTGCTTTCTTCTAGTGAAGGCGATTAAGAATCAAGATATACCAAAGGACCAAAACAGAGAGCCCGAATTGAAAAATTCACCTGCTAAGAGAAAGAAAACACACAAGTCAGGAAAGAACCGCGGCACTACCGATAAAATGGAAAAGCATCTTACTTCAGAAGATGAAGATGCTCTGACAAGAAGGGATGCTGATGGAGAAGCATGGAAGAACTTAAATCAAGCTGATGAAGGTGTTGATGGACGAAGAATTGGTAAAATATTCGTTTCAAATGAAGAGATTGCTAAGGGAAGCAATGGTACGATTGTCCTTGATGGAAGATATGAAGGCCGTCCGGTTGCAGTCAAGCGTCTTGTCAAAACTCATCATAGTGTAGCCTGTAAAGAAATCCAAAACCTCATTGTGTCTGATTATCATCCAAACATTGTCCGATGGCATGGGGTGGAGCGTGATCGAGATTTTATTTACCTTGCACTGGAACGCTGTATTTGCAACTTAGACGATTTGATTCAAATTTATTCAGATATATCAGAAAATTCCAATTTTAGGAAGGACAAAACACCCAAATTGATAAAAGGAAAAATGGAGACAGGAAAGCATGATACACAATATCTTTGGGAAAAAAATGGCCATCCATCACCTCTATTACTGAAATTGATGAGGGATATTGTTTCCGGGGTTGCTCATTTGCATGAACTAGGAATAATACATCGAGATTTGAAACCCCAAAATGTTCTAATAAACAAGGAAAGATCCCTATGTGCGAAGCTTTCTGACATGGGCATTAGCAAACGTCTTCTTGAAAATATGTCCTCTTTGGGTCATAATGCTACTGGTGGGGGCAGTTCAGGCTGGCAAGCCCCAGAACAGCTTGGTCAAGGACGTCAAACACGAGCTGTAGATATATTCAGTTTAGGTTGTGTTCTTTTTTTCTGTATGACTGGGGGAAGACATCCATTTGGACAAAGTCTTGAACGTGATATCAATATTGTGGAAAATCGAAAGGATTTATTCTTAGTTCAGTTCATCCCGGAAGCTGAGGATCTTATTAGCTGTTTATTAAACCCTGAACCTAATCTAAGGCCGAAAGCGATTGAAGTGTTGCACCATCCTTTTTTTTGGTGTTCCGAGAAGAGACTTTCATTTTTACGTGACACTAGTGACAGGGTGGAACTGGAAGATAGAGAGATTAGTTCTAATCTTTTGTGGGCGTTAGAAAGCATTGCCACAACAGCCTTAGGTGGTAAATGGGATGAAAAGATGGAACCAGCTTTCATTGCTAACATTGGTCGTTACCGGCGCTATAAGTTTAACAGTGTTCGAGACTTGTTGCGGGTTATGAGAAACAAGCTAAATCATTATGGAGAATTGCCACAGGAAATCCAGGAATTAGTTGGACCTGTTCCTGAAGGATACAACGACTACTTTGCAAGCCGATTCCCAAGACTCTTGATTGAAGTGTATAATGTCATATGCAAGCATTGCAAGGAGGAAGAGTGTTTTCAAAGGTATTTTAAAAATGATGATTAG 2433 0.4085 MDTQENDPMRVIWSFSTGSPIFSSYQAPVNKERGKENNASAVPVPVSGLVECGDDWSLYMHDKHFGKMRISESIAEFVLRTPTISDDGAVILGSKEISLFEVDAKTGSIIQIHANSDPDNVFAPLSHARQGVRNIMSADPKKLNSSQTLLKIFRTDYSLRSVSPNSRRVLWNLTVAEFEAVLLCQHTTFDVEDGYLSESGLNFAMPYPCQEMQNVFRVKKRFLLESLITESLHGAFPESDILSVAASDLMIPLQPSIDGHPQPLIEITSPGDVYFYKKSGWSTPLPSMLFMVFLLVLGFSLICFLLVKAIKNQDIPKDQNREPELKNSPAKRKKTHKSGKNRGTTDKMEKHLTSEDEDALTRRDADGEAWKNLNQADEGVDGRRIGKIFVSNEEIAKGSNGTIVLDGRYEGRPVAVKRLVKTHHSVACKEIQNLIVSDYHPNIVRWHGVERDRDFIYLALERCICNLDDLIQIYSDISENSNFRKDKTPKLIKGKMETGKHDTQYLWEKNGHPSPLLLKLMRDIVSGVAHLHELGIIHRDLKPQNVLINKERSLCAKLSDMGISKRLLENMSSLGHNATGGGSSGWQAPEQLGQGRQTRAVDIFSLGCVLFFCMTGGRHPFGQSLERDINIVENRKDLFLVQFIPEAEDLISCLLNPEPNLRPKAIEVLHHPFFWCSEKRLSFLRDTSDRVELEDREISSNLLWALESIATTALGGKWDEKMEPAFIANIGRYRRYKFNSVRDLLRVMRNKLNHYGELPQEIQELVGPVPEGYNDYFASRFPRLLIEVYNVICKHCKEEECFQRYFKNDD* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2443 810 SMART serkin_6 389 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2443 810 Gene3D Phosphorylase Kinase; domain 1 377 461 - -
Psa4g2443 810 SMART PGNneu 739 793 - -
Psa4g2443 810 Gene3D - 6 196 IPR015943 GO:0005515
Psa4g2443 810 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 3 806 - -
Psa4g2443 810 Gene3D KEN domain 677 810 IPR038357 -
Psa4g2443 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Psa4g2443 810 Pfam Ribonuclease 2-5A 680 806 IPR010513 GO:0004540|GO:0006397
Psa4g2443 810 CDD RNase_Ire1 678 806 - -
Psa4g2443 810 SUPERFAMILY Protein kinase-like (PK-like) 389 676 IPR011009 -
Psa4g2443 810 Gene3D Transferase(Phosphotransferase) domain 1 500 676 - -
Psa4g2443 810 PANTHER IRE1-RELATED 3 806 IPR045133 GO:0004521|GO:0004674|GO:0030968
Psa4g2443 810 ProSiteProfiles Protein kinase domain profile. 389 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2443 810 Pfam Protein kinase domain 391 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2443 810 MobiDBLite consensus disorder prediction 341 363 - -
Psa4g2443 810 MobiDBLite consensus disorder prediction 318 363 - -
Psa4g2443 810 ProSiteProfiles KEN domain profile. 677 808 IPR010513 GO:0004540|GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2443 Psa-Chr4 195657685 195661512 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2443 415 673 MAP Kinase Kinase Kinase AT3G06030 27.273 3.05e-19 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Psa4g2443 Pkinase 6.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2443 K08852 - gmx:100788389 1152.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2443 4 195657685 195661512 Psa4g2443 4 195657685 195661512 ECH