Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2437 ATGGGTCTCTGTTCTTCCTTTCTCTCTTCCACCTCTGAACCTCCCCAACCATCTTCTTCCTTCAACAGACCTCTTTCCTCAGGTTCAACAAGCACTGTTGGATTCTCTGCAACAACAAGCAGTGCAGGAAGGAGTCAAATCTCCGAAATAGCAAGTGGAAGCATTGATAGTGTTACTGAAGGGTCTCTTCGTGTACCTTCTTCCCCAGATGGTCAAATTCTTGAAAGGCCTAATTTGAAGGTTTTTAGTTACGCTGACTTGAAATCTGCTACCAGAAATTTCAAACCAGATACATTACTCGGTGAAGGTGGTTTTGGAAAAGTTTATAAAGGTTGGTTGGTTGAGAAAACTCTTGCTCCTGCTAAAGCTGGCTCTGGAATGATTGTTGCTATAAAAAAATTGAACTCCGAAAGCACTCAAGGTTTTCAAGAATGGCAGTCAGAAGTCAACTTTTTAGGAAGGCTTTCACACCCAAACTTGGTGAAGCTATTGGGTTATTGTTGGGATGATGAAGAGCTTCTTCTTGTGTATGAGTTCATGCCAAAAGGAAGTTTGGAGAATCATCTTTTCAGAAGAAATCCTAACATTGAACCACTTTCTTGGAACACAAGAATCAAAATAGCTATTGGTGCAGCTAGAGGTTTAGCTTTCTTGCATGAGTCTGAAAAACAAGTTATATACCGAGATTTTAAAGCCTCGAATATACTCCTTGACGGGAGTTACAATGCAAAAATTTCGGATTTCGGATTAGCTAAATTGGGACCTTCTGGAGGACAATCACATGTGACTACAAGGGTCATGGGGACATATGGTTATGCTGCTCCAGAATACATTGCAACAGGGCACTTGTATGTGAAGAGTGACGTATATGGTTTTGGTGTAGTGCTGTTAGAAATCCTAACAGCCATGAGAGCAATGGACACAAAAAGACCATCAGGACAACAAAACCTAGTTGAATGGGTGAAACCTTTTCTATCCAACAAGAAAAAATTGAAAGGCATAATGGATGGAAGAATAGAAGGACAATACTCACAAAAAGCGGCAATACAAGCAGCAGCACTTTCTCTAAAATGCCTAGAAAGTGACCCTAAACAACGTCCTTCTATGAAAGATGTACTTGAGTCATTGGAAGCTATTGAAGCCATTCAAGTCAAGTCCAAGGAATCCAGGAAAAATAGTTCACATCAACCACCAGTTCATCAAGCTGCTAGGCACCAAAGAGTTGTGAGAGTATAG 1236 0.407 MGLCSSFLSSTSEPPQPSSSFNRPLSSGSTSTVGFSATTSSAGRSQISEIASGSIDSVTEGSLRVPSSPDGQILERPNLKVFSYADLKSATRNFKPDTLLGEGGFGKVYKGWLVEKTLAPAKAGSGMIVAIKKLNSESTQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDDEELLLVYEFMPKGSLENHLFRRNPNIEPLSWNTRIKIAIGAARGLAFLHESEKQVIYRDFKASNILLDGSYNAKISDFGLAKLGPSGGQSHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTAMRAMDTKRPSGQQNLVEWVKPFLSNKKKLKGIMDGRIEGQYSQKAAIQAAALSLKCLESDPKQRPSMKDVLESLEAIEAIQVKSKESRKNSSHQPPVHQAARHQRVVRV* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2437 411 MobiDBLite consensus disorder prediction 385 411 - -
Psa4g2437 411 Gene3D Phosphorylase Kinase; domain 1 78 179 - -
Psa4g2437 411 SUPERFAMILY Protein kinase-like (PK-like) 73 377 IPR011009 -
Psa4g2437 411 ProSiteProfiles Protein kinase domain profile. 94 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2437 411 ProSitePatterns Protein kinases ATP-binding region signature. 100 133 IPR017441 GO:0005524
Psa4g2437 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Psa4g2437 411 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 53 391 - -
Psa4g2437 411 Pfam Protein tyrosine and serine/threonine kinase 98 376 IPR001245 GO:0004672|GO:0006468
Psa4g2437 411 CDD STKc_IRAK 100 379 - -
Psa4g2437 411 Gene3D Transferase(Phosphotransferase) domain 1 180 403 - -
Psa4g2437 411 MobiDBLite consensus disorder prediction 1 44 - -
Psa4g2437 411 PANTHER OS01G0588500 PROTEIN-RELATED 53 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2437 Psa-Chr4 195118626 195124546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2437 70 376 Glycoside Hydrolase AT3G07070 50.974 2.84e-106 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa4g2437 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2437 - - gmx:100794193 637.876