Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2412 ATGTTTGAAGGTAGAAATGCGTCTGCACATAATATGTTGCTAGGATTTATTGCCGGCATTTCAACTGTTATGGCATTGGCCTTATTGTTCTGTCTCTTATGGAAAAGGATTATTCCATTTCTTAAACAACCTAACACTTTGAAAGGAAAGGAGTGTAAAGGCTTGAAATATGATAAAACGTCTTTAAGGTGTTTTAAGATTGAGGAACTAGAGAGAGCTACACAAAATTTTAGCCAAGATTGCTTATTGGGTTCTGGTGCGTTTGGTAATGTTTACAAGGGAACTTTTGAGTTAGAAGGAATATTAGCCATAAAGAGACCTCATTCTGAATCATTCTTAAGTGTTGAAGAATTCAGAAATGAAGTTAGGCTTCTTTCAGCTGCAAAGCACAAGAATCTTGTTGGTCTGGTTGGATATTGTGAAGAACCAGAACGAGATGGAGCAAAAATTCTAGTCTATGAATATGTATCCAATGGTTCACTCCTTGAGTACATGATGGGAAACAGAAGGAGAAGCTTAACTTGGAAGCAAAGAATAAACATAGCAATAGGAGCAGCAAAAGGCATAGCTTATTTGCATGAAGAGCTAGACCTGCTGTGGATAATGCTGAAAATTCAAGCAACCAACATATTATTGATTGGGCAAGGCCTAGCATAG 657 0.3729 MFEGRNASAHNMLLGFIAGISTVMALALLFCLLWKRIIPFLKQPNTLKGKECKGLKYDKTSLRCFKIEELERATQNFSQDCLLGSGAFGNVYKGTFELEGILAIKRPHSESFLSVEEFRNEVRLLSAAKHKNLVGLVGYCEEPERDGAKILVYEYVSNGSLLEYMMGNRRRSLTWKQRINIAIGAAKGIAYLHEELDLLWIMLKIQATNILLIGQGLA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2412 218 ProSiteProfiles Protein kinase domain profile. 77 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2412 218 ProSitePatterns Protein kinases ATP-binding region signature. 83 105 IPR017441 GO:0005524
Psa4g2412 218 SUPERFAMILY Protein kinase-like (PK-like) 59 212 IPR011009 -
Psa4g2412 218 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 59 212 - -
Psa4g2412 218 Pfam Protein tyrosine and serine/threonine kinase 81 212 IPR001245 GO:0004672|GO:0006468
Psa4g2412 218 Gene3D Phosphorylase Kinase; domain 1 42 155 - -
Psa4g2412 218 Gene3D Transferase(Phosphotransferase) domain 1 156 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2412 Psa-Chr4 193079540 193081527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2412 9 212 Receptor kinase-like Gene Family AT1G79620 40.000 1.69e-37 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Psa4g2412 PK_Tyr_Ser-Thr 2.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2412 - - gmx:100817470 288.5